RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 ST8SIA2Q92186 375 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 SAMD8Q96LT4 415 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 RSPO3Q9BXY4 272 aaPredicted RBP12.81□□□□□ -0.36
TRIM4-203ENST00000355947 DPAGT1Q9H3H5 408 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 STARD7Q9NQZ5 370 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 OR51B4Q9Y5P0 310 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 CACNG2Q9Y698 323 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 U3KQ87 197 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 M0R233 179 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 PRG2P13727 222 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 GPR1P46091 355 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 PER3P56645 1201 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 DGCR2P98153 550 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 DSG2Q14126 1118 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 GALEQ14376 348 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 KRT33BQ14525 404 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 PRAMEF14Q5SWL7 426 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 PRAMEF13Q5VWM6 474 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 ZNF770Q6IQ21 691 aaPredicted RBP12.8□□□□□ -0.36
TRIM4-203ENST00000355947 ALKAL2Q6UX46 152 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 QSOX2Q6ZRP7 698 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 IQCF2Q8IXL9 164 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 ZNF354BQ96LW1 612 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 GTPBP2Q9BX10 602 aaKnown RBP12.8□□□□□ -0.36
TRIM4-203ENST00000355947 TEX12Q9BXU0 123 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 RNF32Q9H0A6 362 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 MRPL17Q9NRX2 175 aaKnown RBP12.8□□□□□ -0.36
TRIM4-203ENST00000355947 FBXO9Q9UK97 447 aaPredicted RBP12.8□□□□□ -0.36
TRIM4-203ENST00000355947 CDH23Q9H251 3354 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 TP53BP1Q12888 1972 aaPredicted RBP12.8□□□□□ -0.36
TRIM4-203ENST00000355947 HMGN4O00479 90 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 ACP2P11117 423 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 ACSL1P33121 698 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 METAP1P53582 386 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 RGS1Q08116 209 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 ZNF311Q5JNZ3 666 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 FAM71E1Q6IPT2 247 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 TMEM107Q6UX40 140 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 KRT78Q8N1N4 520 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 FBXL6Q8N531 539 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 TMEM163Q8TC26 289 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 GIMAP1Q8WWP7 306 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 ALG14Q96F25 216 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 COQ10AQ96MF6 247 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 DDOQ99489 341 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRIM4-203ENST00000355947 A0A087WUU8 490 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 SLC43A1O75387 559 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 ZNF821O75541 412 aaPredicted RBP12.8□□□□□ -0.36
TRIM4-203ENST00000355947 ITGB7P26010 798 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 GABRA5P31644 462 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 PYCR1P32322 319 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 GCGRP47871 477 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 HCCSP53701 268 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 CLDN12P56749 244 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 SMIM11AP58511 58 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 POLR2LP62875 67 aaKnown RBP12.8□□□□□ -0.36
TRIM4-203ENST00000355947 ELAVL2Q12926 359 aaKnown RBP12.8□□□□□ -0.36
TRIM4-203ENST00000355947 SP140Q13342 867 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 ANGPT1Q15389 498 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 SLC25A35Q3KQZ1 300 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 CDC73Q6P1J9 531 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 C19orf48Q6RUI8 117 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 C17orf64Q86WR6 236 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 KIF18BQ86Y91 864 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 NKAIN4Q8IVV8 208 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 SIAH3Q8IW03 269 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 LSMEM1Q8N8F7 131 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 EFCAB11Q9BUY7 163 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 TMEM38AQ9H6F2 299 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 PPP1R3EQ9H7J1 279 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 P2RX2Q9UBL9 471 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 KCNE3Q9Y6H6 103 aa12.8□□□□□ -0.36
TRIM4-203ENST00000355947 CLTBP09497 229 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 PIPP12273 146 aaPredicted RBP12.79□□□□□ -0.36
TRIM4-203ENST00000355947 ACP5P13686 325 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 PRPH2P23942 346 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 FGL2Q14314 439 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 ARHGEF6Q15052 776 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 ZNF461Q8TAF7 563 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 PXYLP1Q8TE99 480 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 ABHD1Q96SE0 405 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 FUZQ9BT04 418 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 AHSPQ9NZD4 102 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 RABL2AQ9UBK7 228 aaPredicted RBP12.79□□□□□ -0.36
TRIM4-203ENST00000355947 CCL26Q9Y258 94 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 CDH10Q9Y6N8 788 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 PITPNM1O00562 1244 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 PLPP1O14494 284 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 PROM1O43490 865 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 MMP20O60882 483 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 POP7O75817 140 aaKnown RBP12.79□□□□□ -0.36
TRIM4-203ENST00000355947 SOD1P00441 154 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 PRKACAP17612 351 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 HOXC8P31273 242 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 KIAA1024LP59773 190 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 TAP2Q03519 686 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 C12orf73Q69YU5 71 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 NXPE4Q6UWF7 544 aa12.79□□□□□ -0.36
TRIM4-203ENST00000355947 OR51A7Q8NH64 312 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms