RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 OLIG3Q7RTU3 272 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 ANKRD37Q7Z713 158 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 ZDHHC21Q8IVQ6 265 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 ZNF321PQ8N8H1 164 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 OR1N1Q8NGS0 311 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 APOBEC4Q8WW27 367 aaKnown RBP8.92□□□□□ -0.98
NPHP1-202ENST00000355301 SLC46A1Q96NT5 459 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 BTBD9Q96Q07 612 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 CRB3Q9BUF7 120 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 BDH2Q9BUT1 245 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 SAP130Q9H0E3 1048 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 SEMA6AQ9H2E6 1030 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 MTHFD2LQ9H903 347 aaPredicted RBP8.92□□□□□ -0.98
NPHP1-202ENST00000355301 SEC14L3Q9UDX4 400 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 PPIEQ9UNP9 301 aaKnown RBP8.92□□□□□ -0.98
NPHP1-202ENST00000355301 CCDC88CQ9P219 2028 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 RIF1Q5UIP0 2472 aaKnown RBP8.92□□□□□ -0.98
NPHP1-202ENST00000355301 KCNK2O95069 426 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 CST1P01037 141 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 FESP07332 822 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 CD63P08962 238 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 TRHRP34981 398 aaPredicted RBP8.92□□□□□ -0.98
NPHP1-202ENST00000355301 GPR143P51810 404 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 POU6F2P78424 691 aaPredicted RBP8.92□□□□□ -0.98
NPHP1-202ENST00000355301 SFT2D3Q587I9 215 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 C3orf38Q5JPI3 329 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 FAAH2Q6GMR7 532 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 C6orf15Q6UXA7 325 aaPredicted RBP8.92□□□□□ -0.98
NPHP1-202ENST00000355301 NPSR1Q6W5P4 371 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 TMPRSS12Q86WS5 348 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 GPR32P1Q8NGA4 272 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 GEMIN6Q8WXD5 167 aaKnown RBP8.92□□□□□ -0.98
NPHP1-202ENST00000355301 PMM1Q92871 262 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 ZG16BQ96DA0 208 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 ZNF354BQ96LW1 612 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 ITPAQ9BY32 194 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 B3GNT4Q9C0J1 378 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 VCX3BQ9H321 246 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 NTN4Q9HB63 628 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 Q9N2J8 555 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 POLE3Q9NRF9 147 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 THSD1Q9NS62 852 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 DNAJB9Q9UBS3 223 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 COPS7AQ9UBW8 275 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 C19orf25Q9UFG5 118 aaPredicted RBP8.92□□□□□ -0.98
NPHP1-202ENST00000355301 MKLN1Q9UL63 735 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 PADI1Q9ULC6 663 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 GPR55Q9Y2T6 319 aaPredicted RBP8.92□□□□□ -0.98
NPHP1-202ENST00000355301 WDR45Q9Y484 360 aa8.92□□□□□ -0.98
NPHP1-202ENST00000355301 GXYLT2A0PJZ3 443 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 PRAMEF25A6NGN4 478 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 SAGE2PA6NJ88 616 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 OR6C76A6NM76 312 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 BRINP1O60477 761 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 DPM1O60762 260 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 ALPPP05187 535 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 CCNYL3P0C7X3 344 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 PABPC4LP0CB38 370 aaKnown RBP8.91□□□□□ -0.98
NPHP1-202ENST00000355301 PIGAP37287 484 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 PPICP45877 212 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 KCNC4Q03721 635 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 TARDBPQ13148 414 aaKnown RBP eCLIP8.91□□□□□ -0.98
NPHP1-202ENST00000355301 PUM1Q14671 1186 aaKnown RBP eCLIP8.91□□□□□ -0.98
NPHP1-202ENST00000355301 LRRC36Q1X8D7 754 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 CCNJQ5T5M9 372 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 TIPARPQ7Z3E1 657 aaKnown RBP8.91□□□□□ -0.98
NPHP1-202ENST00000355301 CPEB2Q7Z5Q1 589 aaKnown RBP8.91□□□□□ -0.98
NPHP1-202ENST00000355301 ZSCAN1Q8NBB4 408 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 CATSPER1Q8NEC5 780 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 NFAM1Q8NET5 270 aaPredicted RBP8.91□□□□□ -0.98
NPHP1-202ENST00000355301 B3GNT7Q8NFL0 401 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 OR4N2Q8NGD1 307 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 OR2Y1Q8NGV0 311 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 SPPL2AQ8TCT8 520 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 EME1Q96AY2 570 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 WDR77Q9BQA1 342 aaPredicted RBP8.91□□□□□ -0.98
NPHP1-202ENST00000355301 NUDT9Q9BW91 350 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 SEMA4CQ9C0C4 833 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 KLHL4Q9C0H6 718 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 QRSL1Q9H0R6 528 aaKnown RBP8.91□□□□□ -0.98
NPHP1-202ENST00000355301 ABCG2Q9UNQ0 655 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 SH3GLB1Q9Y371 365 aa8.91□□□□□ -0.98
NPHP1-202ENST00000355301 FREM2Q5SZK8 3169 aa8.9□□□□□ -0.98
NPHP1-202ENST00000355301 IGHV3-20A0A0C4DH32 117 aa8.9□□□□□ -0.98
NPHP1-202ENST00000355301 AGAP5A6NIR3 686 aa8.9□□□□□ -0.98
NPHP1-202ENST00000355301 hCG_2039718K7EN88 272 aa8.9□□□□□ -0.98
NPHP1-202ENST00000355301 PCDH17O14917 1159 aa8.9□□□□□ -0.98
NPHP1-202ENST00000355301 KIAA0513O60268 411 aa8.9□□□□□ -0.98
NPHP1-202ENST00000355301 UMODP07911 640 aa8.9□□□□□ -0.98
NPHP1-202ENST00000355301 ITGA2P17301 1181 aa8.9□□□□□ -0.98
NPHP1-202ENST00000355301 DRD5P21918 477 aa8.9□□□□□ -0.98
NPHP1-202ENST00000355301 RPS4Y1P22090 263 aaKnown RBP8.9□□□□□ -0.98
NPHP1-202ENST00000355301 PRKAR1BP31321 381 aa8.9□□□□□ -0.98
NPHP1-202ENST00000355301 OR1E2P47887 323 aa8.9□□□□□ -0.98
NPHP1-202ENST00000355301 DCAF7P61962 342 aa8.9□□□□□ -0.98
NPHP1-202ENST00000355301 NHLH1Q02575 133 aa8.9□□□□□ -0.98
NPHP1-202ENST00000355301 EBPQ15125 230 aaKnown RBP8.9□□□□□ -0.98
NPHP1-202ENST00000355301 GRAMD1BQ3KR37 738 aa8.9□□□□□ -0.98
NPHP1-202ENST00000355301 CYP27C1Q4G0S4 372 aa8.9□□□□□ -0.98
NPHP1-202ENST00000355301 FIGNL1Q6PIW4 674 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms