RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CDHR3Q6ZTQ4 885 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CYP4V2Q6ZWL3 525 aaPredicted RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 PTF1AQ7RTS3 328 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 GPBP1Q86WP2 473 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 DCP1BQ8IZD4 617 aaKnown RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 PDCL2Q8N4E4 241 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ZNRF1Q8ND25 227 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 OR13A1Q8NGR1 328 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 OR1B1Q8NGR6 318 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 C11orf45Q8TAV5 145 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 LNX1Q8TBB1 728 aaPredicted RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 HPSE2Q8WWQ2 592 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 HIST1H2ACQ93077 130 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 SLC41A3Q96GZ6 507 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF48Q96MX3 618 aaPredicted RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 TRPV5Q9NQA5 729 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 POLE4Q9NR33 117 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ZFP57Q9NU63 452 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF446Q9NWS9 450 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 BCAP29Q9UHQ4 241 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 PRDM4Q9UKN5 801 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 FKBP7Q9Y680 259 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 LAMA3Q16787 3333 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 RYR1P21817 5038 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 NEO1Q92859 1461 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 METP08581 1390 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 IGHV4OR15-8A0A075B7B6 117 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 H0YC42 278 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 AKR7A2O43488 359 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 RHBDL1O75783 438 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 PRSS2P07478 247 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 FAM157CP0CG43 387 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 PNMTP11086 282 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 FGF3P11487 239 aaPredicted RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 HPCAL1P37235 193 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 DCTP40126 519 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 LEPRP48357 1165 aaKnown RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 DVL1P1P54792 670 aaPredicted RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 INHBCP55103 352 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 HYAL1Q12794 435 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 GRB14Q14449 540 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 RCN1Q15293 331 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 BEND6Q5SZJ8 279 aaPredicted RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 CELF3Q5SZQ8 465 aaKnown RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 ATP1A1-AS1Q5TC04 95 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 AGAP7PQ5VUJ5 663 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 PLPP4Q5VZY2 271 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 RBMS3Q6XE24 437 aaKnown RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 DPY19L2P2Q6ZN68 376 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 LANCL3Q6ZV70 420 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 PAQR9Q6ZVX9 377 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 CREB3L2Q70SY1 520 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 CENPSQ8N2Z9 138 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 CNBD1Q8NA66 436 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 BHLHE23Q8NDY6 225 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 AGAP4Q96P64 663 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 IL17FQ96PD4 163 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 LPAR4Q99677 370 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 RBM4Q9BWF3 364 aaKnown RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 S100A14Q9HCY8 104 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 APMAPQ9HDC9 416 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 STARD5Q9NSY2 213 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 ANAPC7Q9UJX3 599 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 ATP7AQ04656 1500 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 SBF1O95248 1867 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 SALL1Q9NSC2 1324 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 CFAP74Q9C0B2 1584 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 GOLGA6L7A0A1B0GV03 622 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 DNAJC9-AS1A6NH13 148 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 NPIPB9F8W1W9 429 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 DUX1O43812 170 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 MAGEC1O60732 1142 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 GLRA3O75311 464 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 CDC123O75794 336 aaPredicted RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 CIB2O75838 187 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 CDK2AP2O75956 126 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 DFFBO76075 338 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 NDUFA7O95182 113 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 CSF2P04141 144 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 FCGR1AP12314 374 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 ANXA8P13928 327 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 LIFP15018 202 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 GALP22466 123 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 CCNCP24863 283 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 ATP1B3P54709 279 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 ELLP55199 621 aaPredicted RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 MRPS6P82932 125 aaKnown RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 BDH1Q02338 343 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 HSPA14Q0VDF9 509 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 ZP4Q12836 540 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 IFT88Q13099 833 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 KNOP1Q1ED39 458 aaKnown RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 TMEM44Q2T9K0 475 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 ASPRV1Q53RT3 343 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 CAVIN4Q5BKX8 364 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF311Q5JNZ3 666 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 ANXA8L1Q5VT79 327 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 DMKNQ6E0U4 476 aaPredicted RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 HIST2H2AA3Q6FI13 130 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms