RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 MAKP20794 623 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 CCR7P32248 378 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 MAP3K8P41279 467 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 UBE2KP61086 200 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 PCGF3Q3KNV8 242 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 CLEC12AQ5QGZ9 265 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 NCBP2-AS2Q69YL0 99 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 OR4C5Q8NGB2 326 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 RAB40AQ8WXH6 277 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 CMTM7Q96FZ5 175 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 PPP1R16AQ96I34 528 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 TINAGL1Q9GZM7 467 aaPredicted RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 OR52A5Q9H2C5 316 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 UBQLN3Q9H347 655 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 AGO3Q9H9G7 860 aaKnown RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 RDH14Q9HBH5 336 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 P2RX2Q9UBL9 471 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 C19orf81C9J6K1 198 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 H7C417 338 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ZBTB7AO95365 584 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 GOT2P00505 430 aaKnown RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 GABRB1P18505 474 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 RAB6AP20340 208 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 APEX1P27695 318 aaKnown RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 HCAR3P49019 387 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 KCNIP4Q6PIL6 250 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 C1orf87Q8N0U7 546 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 KDF1Q8NAX2 398 aaPredicted RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 BVESQ8NE79 360 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 NETO1Q8TDF5 533 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 NECTIN4Q96NY8 510 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 PIGQQ9BRB3 760 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 NIPSNAP3BQ9BS92 247 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 SYT11Q9BT88 431 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 OR51I1Q9H343 314 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 LYRM2Q9NU23 88 aaPredicted RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 DMRT1Q9Y5R6 373 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 BCL9LQ86UU0 1499 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 A0A1W2PS29 197 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ENTPD3O75355 529 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 NR2C1P13056 603 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 PGAM2P15259 253 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 BDKRB2P30411 391 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 SNCAP37840 140 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 RBMXP38159 391 aaKnown RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 CACNG1Q06432 222 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 DSC1Q08554 894 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 SP140Q13342 867 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 RIN1Q13671 783 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 MEF2DQ14814 521 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ARMC12Q5T9G4 340 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 CPZQ66K79 652 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 KDM4DQ6B0I6 523 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 KDELC1Q6UW63 502 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ETV3LQ6ZN32 361 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ZBTB2Q8N680 514 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 POMGNT2Q8NAT1 580 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 OR2T33Q8NG76 320 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 OR5D16Q8NGK9 328 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 EDEM1Q92611 657 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 SLCO4A1Q96BD0 722 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 WDFY2Q96P53 400 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 KCNA7Q96RP8 456 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 PRRT1Q99946 306 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ZNF559Q9BR84 538 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 B3GNT4Q9C0J1 378 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 GTF2IRD1Q9UHL9 959 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ZNF230Q9UIE0 474 aaPredicted RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 PCNX2A6NKB5 2137 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 C8GP07360 202 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 RHOCP08134 193 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 OR8U9P0C7N5 309 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ZBTB48P10074 688 aaPredicted RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 RPIAP49247 311 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 SORDQ00796 357 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 UBXN2BQ14CS0 331 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 APOOLQ6UXV4 268 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 VRK3Q8IV63 474 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ZFPM1Q8IX07 1006 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 NPAS3Q8IXF0 933 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ZBTB45Q96K62 511 aaPredicted RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 MOGAT1Q96PD6 335 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 TMEM27Q9HBJ8 222 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 PURGQ9UJV8 347 aaKnown RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 TRABD2BA6NFA1 517 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 A8MVJ9 347 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 SNRPGP15A8MWD9 76 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ATG13O75143 517 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 IL1RNP18510 177 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 KIR2DL3P43628 341 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 UNC50Q53HI1 259 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 B3GNTL1Q67FW5 361 aaPredicted RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 LRRC70Q7Z2Q7 622 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 OSTM1Q86WC4 334 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 KLBQ86Z14 1044 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 TMC8Q8IU68 726 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 SLC5A8Q8N695 610 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ZBED6CLQ96FA7 236 aaPredicted RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 MARVELD1Q9BSK0 173 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms