RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 RPP25Q9BUL9 199 aaKnown RBP20.72■□□□□ 0.91
UPF3A-201ENST00000351487 TWSG1Q9GZX9 223 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 IGFLR1Q9H665 355 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 PCOLCE2Q9UKZ9 415 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 YBX2Q9Y2T7 364 aaKnown RBP20.72■□□□□ 0.91
UPF3A-201ENST00000351487 POM121BA6NF01 834 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 IL1AP01583 271 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 PDX1P52945 283 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 DECR1Q16698 335 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 DESI1Q6ICB0 168 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 CDC73Q6P1J9 531 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 FRRS1Q6ZNA5 592 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 MEX3DQ86XN8 651 aaKnown RBP20.72■□□□□ 0.91
UPF3A-201ENST00000351487 SAMD14Q8IZD0 417 aaPredicted RBP20.72■□□□□ 0.91
UPF3A-201ENST00000351487 OR52P1PQ8NH57 321 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 ADAMTS15Q8TE58 950 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 ACOT11Q8WXI4 607 aaPredicted RBP20.72■□□□□ 0.91
UPF3A-201ENST00000351487 ASB15Q8WXK1 588 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 OR1E3Q8WZA6 343 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 SLC22A18Q96BI1 424 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 RNFT2Q96EX2 444 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 FCRL4Q96PJ5 515 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 NELL2Q99435 816 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 SACM1LQ9NTJ5 587 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 TXNL4BQ9NX01 149 aaKnown RBP20.72■□□□□ 0.91
UPF3A-201ENST00000351487 CNIH4Q9P003 139 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 ZNF624Q9P2J8 865 aaPredicted RBP20.72■□□□□ 0.91
UPF3A-201ENST00000351487 PHF11Q9UIL8 331 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 AGR2O95994 175 aa20.71■□□□□ 0.91
UPF3A-201ENST00000351487 CCNYL3P0C7X3 344 aa20.71■□□□□ 0.91
UPF3A-201ENST00000351487 FPR3P25089 353 aa20.71■□□□□ 0.91
UPF3A-201ENST00000351487 GDPD3Q7L5L3 318 aa20.71■□□□□ 0.91
UPF3A-201ENST00000351487 TRIM73Q86UV7 250 aa20.71■□□□□ 0.91
UPF3A-201ENST00000351487 ANKK1Q8NFD2 765 aa20.71■□□□□ 0.91
UPF3A-201ENST00000351487 OR7G2Q8NG99 324 aa20.71■□□□□ 0.91
UPF3A-201ENST00000351487 FLVCR1-AS1Q8TAF5 88 aa20.71■□□□□ 0.91
UPF3A-201ENST00000351487 FAM46AQ96IP4 442 aaKnown RBP20.71■□□□□ 0.91
UPF3A-201ENST00000351487 C6orf106Q9H6K1 298 aaPredicted RBP20.71■□□□□ 0.91
UPF3A-201ENST00000351487 SNTG1Q9NSN8 517 aa20.71■□□□□ 0.91
UPF3A-201ENST00000351487 KCMF1Q9P0J7 381 aa20.71■□□□□ 0.91
UPF3A-201ENST00000351487 EXOSC1Q9Y3B2 195 aaKnown RBP20.71■□□□□ 0.91
UPF3A-201ENST00000351487 V9GYH0 126 aa20.71■□□□□ 0.91
UPF3A-201ENST00000351487 SLC35G6P0C7Q6 338 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 MTNR1AP48039 350 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 RGS8P57771 180 aaPredicted RBP20.7■□□□□ 0.9
UPF3A-201ENST00000351487 COPZ1P61923 177 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 PSPHP78330 225 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 CHAC2Q8WUX2 184 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 SLC9A6Q92581 669 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 SLC25A46Q96AG3 418 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 TM4SF19Q96DZ7 209 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 KLHL25Q9H0H3 589 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 CARD8Q9Y2G2 431 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 A0A1W2PQF6 199 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 AP3D1O14617 1153 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 SNPHO15079 494 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 FCMRO60667 390 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 SMIM10L1P0DMW3 83 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 LAMP2P13473 410 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 EN2P19622 333 aaPredicted RBP20.7■□□□□ 0.9
UPF3A-201ENST00000351487 AK4P27144 223 aaPredicted RBP20.7■□□□□ 0.9
UPF3A-201ENST00000351487 AVPR1BP47901 424 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 RUNX1T1Q06455 604 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 SELENBP1Q13228 472 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 TPBGQ13641 420 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 NFATC4Q14934 902 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 C9orf50Q5SZB4 431 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 CCBE1Q6UXH8 406 aaPredicted RBP20.7■□□□□ 0.9
UPF3A-201ENST00000351487 TMEM184AQ6ZMB5 413 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 RRM2BQ7LG56 351 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 OR2L13Q8N349 312 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 CLDN22Q8N7P3 220 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 SLC16A11Q8NCK7 471 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 TOR1AIP2Q8NFQ8 470 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 SMIM10Q96HG1 83 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 MIR1-1HGQ9H1L0 117 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 SRMSQ9H3Y6 488 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 PRDM9Q9NQV7 894 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 GPR52Q9Y2T5 361 aa20.7■□□□□ 0.9
UPF3A-201ENST00000351487 SPIN1Q9Y657 262 aaPredicted RBP20.7■□□□□ 0.9
UPF3A-201ENST00000351487 KLF4O43474 513 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 NARSO43776 548 aaKnown RBP20.69■□□□□ 0.9
UPF3A-201ENST00000351487 OR5F1O95221 314 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 COL9A1P20849 921 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 STAT5AP42229 794 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 TMED10P49755 219 aaKnown RBP20.69■□□□□ 0.9
UPF3A-201ENST00000351487 SNRPNP63162 240 aaKnown RBP20.69■□□□□ 0.9
UPF3A-201ENST00000351487 KIR2DS3Q14952 304 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 LARS2Q15031 903 aaKnown RBP20.69■□□□□ 0.9
UPF3A-201ENST00000351487 PLK5Q496M5 336 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 C6orf132Q5T0Z8 1188 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 SDE2Q6IQ49 451 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 PLEKHM3Q6ZWE6 761 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 LAPTM4BQ86VI4 370 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 SETD6Q8TBK2 473 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 GPR151Q8TDV0 419 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 TM9SF4Q92544 642 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 SERINC2Q96SA4 455 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 ERVK13-1Q9NX77 482 aa20.69■□□□□ 0.9
UPF3A-201ENST00000351487 IL20Q9NYY1 176 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms