RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 CHFRQ96EP1 664 aa13.41□□□□□ -0.26
RLIM-202ENST00000349225 C20orf85Q9H1P6 137 aa13.41□□□□□ -0.26
RLIM-202ENST00000349225 NPDC1Q9NQX5 325 aaPredicted RBP13.41□□□□□ -0.26
RLIM-202ENST00000349225 SESN1Q9Y6P5 492 aa13.41□□□□□ -0.26
RLIM-202ENST00000349225 K7ERQ8 282 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 FZD7O75084 574 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 SIX6O95475 246 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 TFP02787 698 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 FURINP09958 794 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 TIA1P31483 386 aaKnown RBP eCLIP13.4□□□□□ -0.26
RLIM-202ENST00000349225 ASMTP46597 345 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 AKR1D1P51857 326 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 HLXQ14774 488 aaPredicted RBP13.4□□□□□ -0.26
RLIM-202ENST00000349225 CDKL4Q5MAI5 379 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 TNFAIP8L2Q6P589 184 aaPredicted RBP13.4□□□□□ -0.26
RLIM-202ENST00000349225 PRSS45Q7RTY3 260 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 HMGN2P46Q86SG4 172 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 FBXO15Q8NCQ5 510 aaPredicted RBP13.4□□□□□ -0.26
RLIM-202ENST00000349225 GPR26Q8NDV2 337 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 BBS1Q8NFJ9 593 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 SLC5A11Q8WWX8 675 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 FBXO32Q969P5 355 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 REEP4Q9H6H4 257 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 ANGPT4Q9Y264 503 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 EXOSC1Q9Y3B2 195 aaKnown RBP13.4□□□□□ -0.26
RLIM-202ENST00000349225 ARPC4-TTLL3A0A0A6YYG9 625 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 MCRIP1C9JLW8 97 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 IFNA14P01570 189 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 CCND3P30281 292 aaPredicted RBP13.4□□□□□ -0.26
RLIM-202ENST00000349225 SOAT1P35610 550 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 HOXA1P49639 335 aaPredicted RBP13.4□□□□□ -0.26
RLIM-202ENST00000349225 RPS13P62277 151 aaKnown RBP13.4□□□□□ -0.26
RLIM-202ENST00000349225 KCNA10Q16322 511 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 CCSMST1Q4G0I0 132 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 PABPC1L2AQ5JQF8 200 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 LIPJQ5W064 366 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 SMARCD3Q6STE5 483 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 SERPINA13PQ6UXR4 307 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 IQCHQ86VS3 1027 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 OR8K3Q8NH51 312 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 RAB8BQ92930 207 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 ORAI3Q9BRQ5 295 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 FBXO44Q9H4M3 255 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 AUNIPQ9H7T9 357 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 CXorf36Q9H7Y0 433 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 CTPS2Q9NRF8 586 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 MRPL15Q9P015 296 aaKnown RBP13.4□□□□□ -0.26
RLIM-202ENST00000349225 RPS6KB2Q9UBS0 482 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 OR6C65A6NJZ3 312 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 M0R3H8 397 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 SUSD5O60279 629 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 B4GALT2O60909 372 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 B3GALNT1O75752 331 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 HIST1H2AGP0C0S8 130 aaPredicted RBP13.4□□□□□ -0.26
RLIM-202ENST00000349225 HIST1H2ADP20671 130 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 LTB4RQ15722 352 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 HIST2H2AA3Q6FI13 130 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 REEP3Q6NUK4 255 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 CMIPQ8IY22 773 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 POGLUT1Q8NBL1 392 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 MORN4Q8NDC4 146 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 FANK1Q8TC84 345 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 ACOT12Q8WYK0 555 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 SUSD3Q96L08 255 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 HIST1H2AJQ99878 128 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 SPRTNQ9H040 489 aaPredicted RBP13.4□□□□□ -0.26
RLIM-202ENST00000349225 SGK2Q9HBY8 427 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 CD93Q9NPY3 652 aa13.4□□□□□ -0.26
RLIM-202ENST00000349225 SLC9B1P1A6NJY1 282 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 GPR37L1O60883 481 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 MST1P26927 711 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 ACSL1P33121 698 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 KLF9Q13886 244 aaPredicted RBP13.39□□□□□ -0.27
RLIM-202ENST00000349225 OR5M10Q6IEU7 315 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 SLC30A6Q6NXT4 461 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 NHLRC1Q6VVB1 395 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 PM20D2Q8IYS1 436 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 OR4K5Q8NGD3 323 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 RPLP0P6Q8NHW5 317 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 PIGKQ92643 395 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 TMEM19Q96HH6 336 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 IL20Q9NYY1 176 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 NTMQ9P121 344 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 GFYI3L273 518 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 GALR3O60755 368 aaPredicted RBP13.39□□□□□ -0.27
RLIM-202ENST00000349225 ADAM11O75078 769 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 SRPRAP08240 638 aaKnown RBP13.39□□□□□ -0.27
RLIM-202ENST00000349225 HNF1BP35680 557 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 VEGFCP49767 419 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 HNMTP50135 292 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 RNF219Q5W0B1 726 aaPredicted RBP13.39□□□□□ -0.27
RLIM-202ENST00000349225 SFRP4Q6FHJ7 346 aaPredicted RBP13.39□□□□□ -0.27
RLIM-202ENST00000349225 SFXN4Q6P4A7 337 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 SLC36A4Q6YBV0 504 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 TRMT10AQ8TBZ6 339 aaKnown RBP13.39□□□□□ -0.27
RLIM-202ENST00000349225 HAVCR2Q8TDQ0 301 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 UPF1Q92900 1129 aaKnown RBP eCLIP13.39□□□□□ -0.271e-8■□□□□ 9.7
RLIM-202ENST00000349225 ZFP3Q96NJ6 502 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 SLC38A3Q99624 504 aa13.39□□□□□ -0.27
RLIM-202ENST00000349225 TM6SF2Q9BZW4 377 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms