RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 APMAPQ9HDC9 416 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 SLC22A11Q9NSA0 550 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 KLHL28Q9NXS3 571 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 MKLN1Q9UL63 735 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 ZNF232Q9UNY5 417 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 FER1L5A0AVI2 2057 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 HS6ST1O60243 411 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 ONECUT2O95948 504 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 ALBP02768 609 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 YAP1P46937 504 aaKnown RBP17.36■□□□□ 0.37
PTN-201ENST00000348225 MC2RQ01718 297 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 ILKQ13418 452 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 LARS2Q15031 903 aaKnown RBP17.36■□□□□ 0.37
PTN-201ENST00000348225 RFX4Q33E94 735 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 PRSS58Q8IYP2 241 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 DHRSXQ8N5I4 330 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 ZNF615Q8N8J6 731 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 BMPERQ8N8U9 685 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 SLC38A9Q8NBW4 561 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 PLPP5Q8NEB5 264 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 OR14A16Q8NHC5 309 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 VANGL1Q8TAA9 524 aaPredicted RBP17.36■□□□□ 0.37
PTN-201ENST00000348225 STT3BQ8TCJ2 826 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 PTPMT1Q8WUK0 201 aaPredicted RBP17.36■□□□□ 0.37
PTN-201ENST00000348225 TFAP2CQ92754 450 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 DAZLQ92904 295 aaKnown RBP17.36■□□□□ 0.37
PTN-201ENST00000348225 CNBD2Q96M20 576 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 CDC6Q99741 560 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 QRSL1Q9H0R6 528 aaKnown RBP17.36■□□□□ 0.37
PTN-201ENST00000348225 SMURF2Q9HAU4 748 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 Q9N2J8 555 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 FBXO8Q9NRD0 319 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 RXFP3Q9NSD7 469 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 PDP1Q9P0J1 537 aaPredicted RBP17.36■□□□□ 0.37
PTN-201ENST00000348225 KIF17Q9P2E2 1029 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 CFL2Q9Y281 166 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 LYVE1Q9Y5Y7 322 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 KIAA0513O60268 411 aa17.35■□□□□ 0.37
PTN-201ENST00000348225 ZIC2O95409 532 aaPredicted RBP17.35■□□□□ 0.37
PTN-201ENST00000348225 THBS1P07996 1170 aa17.35■□□□□ 0.37
PTN-201ENST00000348225 GUSBP08236 651 aa17.35■□□□□ 0.37
PTN-201ENST00000348225 ZGLP1P0C6A0 271 aa17.35■□□□□ 0.37
PTN-201ENST00000348225 AGXTP21549 392 aa17.35■□□□□ 0.37
PTN-201ENST00000348225 TRHRP34981 398 aaPredicted RBP17.35■□□□□ 0.37
PTN-201ENST00000348225 RAD23AP54725 363 aa17.35■□□□□ 0.37
PTN-201ENST00000348225 CDH12P55289 794 aa17.35■□□□□ 0.37
PTN-201ENST00000348225 PSG6Q00889 435 aa17.35■□□□□ 0.37
PTN-201ENST00000348225 E2F1Q01094 437 aa17.35■□□□□ 0.37
PTN-201ENST00000348225 SPEM2Q0P670 501 aa17.35■□□□□ 0.37
PTN-201ENST00000348225 EIPR1Q53HC9 387 aa17.35■□□□□ 0.37
PTN-201ENST00000348225 CCNJQ5T5M9 372 aa17.35■□□□□ 0.37
PTN-201ENST00000348225 ZNF605Q86T29 641 aa17.35■□□□□ 0.37
PTN-201ENST00000348225 C16orf52Q8NHV5 167 aa17.35■□□□□ 0.37
PTN-201ENST00000348225 SENP5Q96HI0 755 aaPredicted RBP17.35■□□□□ 0.37
PTN-201ENST00000348225 RSPO3Q9BXY4 272 aaPredicted RBP17.35■□□□□ 0.37
PTN-201ENST00000348225 ANKRD60Q9BZ19 345 aa17.35■□□□□ 0.37
PTN-201ENST00000348225 SAP130Q9H0E3 1048 aa17.35■□□□□ 0.37
PTN-201ENST00000348225 C3orf18Q9UK00 162 aa17.35■□□□□ 0.37
PTN-201ENST00000348225 ZNF443Q9Y2A4 671 aaPredicted RBP17.35■□□□□ 0.37
PTN-201ENST00000348225 ASCC3Q8N3C0 2202 aaKnown RBP17.35■□□□□ 0.37
PTN-201ENST00000348225 GXYLT2A0PJZ3 443 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 TMX2-CTNND1H3BSU7 103 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 J3KTA2 159 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 KCNK2O95069 426 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 GADD45GO95257 159 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 SNAP29O95721 258 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 DBIP07108 87 aaKnown RBP17.34■□□□□ 0.37
PTN-201ENST00000348225 CAPGP40121 348 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 GPR68Q15743 365 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 SLC36A3Q495N2 470 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 ZNF385CQ66K41 422 aaPredicted RBP17.34■□□□□ 0.37
PTN-201ENST00000348225 FIGNL1Q6PIW4 674 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 DEF8Q6ZN54 512 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 OVCH1Q7RTY7 1134 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 HMGN2P46Q86SG4 172 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 VRK2Q86Y07 508 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 CHERPQ8IWX8 916 aaKnown RBP17.34■□□□□ 0.37
PTN-201ENST00000348225 CYGBQ8WWM9 190 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 RMND5BQ96G75 393 aaPredicted RBP17.34■□□□□ 0.37
PTN-201ENST00000348225 SLC46A1Q96NT5 459 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 CMKLR1Q99788 373 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 PRRX2Q99811 253 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 CTRCQ99895 268 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 STRADBQ9C0K7 418 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 SEMA4GQ9NTN9 838 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 KCND3Q9UK17 655 aa17.34■□□□□ 0.37
PTN-201ENST00000348225 AGAP5A6NIR3 686 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 A8MUA0 341 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 B4E171 279 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 H0YAE9 185 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 M0R3H8 397 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 BRINP1O60477 761 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 CBFA2T3O75081 653 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 HEXBP07686 556 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 IL7RP16871 459 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 PRKACGP22612 351 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 IGFBP5P24593 272 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 TSPAN7P41732 249 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 SMIM11AP58511 58 aa17.33■□□□□ 0.37
PTN-201ENST00000348225 LIN52Q52LA3 116 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms