RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 EPCAMP16422 314 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 NDUFV2P19404 249 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 PVALBP20472 110 aaPredicted RBP7.64□□□□□ -1.19
UBE4B-202ENST00000343090 IRF5Q13568 498 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 CST6Q15828 149 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 USF2Q15853 346 aaPredicted RBP7.64□□□□□ -1.19
UBE4B-202ENST00000343090 MAPK14Q16539 360 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 DEFB110Q30KQ9 67 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 SH2D5Q6ZV89 423 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 CREB3L2Q70SY1 520 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 KCTD9Q7L273 389 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 TMIEQ8NEW7 156 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 CASTOR1Q8WTX7 329 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 SLC7A6Q92536 515 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 TCEAL4Q96EI5 215 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 CLMPQ9H6B4 373 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 ZNF334Q9HCZ1 680 aaPredicted RBP7.64□□□□□ -1.19
UBE4B-202ENST00000343090 DMRT3Q9NQL9 472 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 LOC102723532A0A0G2JNH3 316 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 SH3D21A4FU49 640 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 TRIM64A6NGJ6 449 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 TRIM64BA6NI03 449 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 HHLA1C9JL84 531 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 OR7A17O14581 309 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 ZNF195O14628 629 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 PCDH17O14917 1159 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 SCO2O43819 266 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 SLC19A2O60779 497 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 LDOC1O95751 146 aaPredicted RBP7.64□□□□□ -1.19
UBE4B-202ENST00000343090 ADAP00813 363 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 HOXD8P13378 290 aaPredicted RBP7.64□□□□□ -1.19
UBE4B-202ENST00000343090 TGFBR1P36897 503 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 DHPSP49366 369 aaPredicted RBP7.64□□□□□ -1.19
UBE4B-202ENST00000343090 DEFB103AP81534 67 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 SHC2P98077 582 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 NTRK2Q16620 822 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 ZC3H14Q6PJT7 736 aaKnown RBP7.64□□□□□ -1.19
UBE4B-202ENST00000343090 LINC00299Q6ZSB3 139 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 MSANTD1Q6ZTZ1 278 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 TEX26Q8N6G2 289 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 B3GNT7Q8NFL0 401 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 OR4K13Q8NH42 304 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 NR4A3Q92570 626 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 RAB7BQ96AH8 199 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 WDR92Q96MX6 357 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 ZNF300Q96RE9 604 aaPredicted RBP7.64□□□□□ -1.19
UBE4B-202ENST00000343090 NTMT1Q9BV86 223 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 LHX3Q9UBR4 397 aa7.64□□□□□ -1.19
UBE4B-202ENST00000343090 NOP16Q9Y3C1 178 aaKnown RBP7.64□□□□□ -1.19
UBE4B-202ENST00000343090 AHDC1Q5TGY3 1603 aaPredicted RBP7.63□□□□□ -1.19
UBE4B-202ENST00000343090 METTL21EPA6NDL7 271 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 ITGAMP11215 1152 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 HOXD9P28356 352 aaPredicted RBP7.63□□□□□ -1.19
UBE4B-202ENST00000343090 ERVK-25P63136 954 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 CAMK2BQ13554 666 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 SEC23BQ15437 767 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 LRRC37A5PQ49AS3 106 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 EOGTQ5NDL2 527 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 PHF19Q5T6S3 580 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 CPZQ66K79 652 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 C1orf94Q6P1W5 598 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 RASGRP3Q8IV61 690 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 SLC38A6Q8IZM9 456 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 CBARPQ8N350 705 aaPredicted RBP7.63□□□□□ -1.19
UBE4B-202ENST00000343090 OR5T3Q8NGG3 340 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 OR52E2Q8NGJ4 325 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 CCDC107Q8WV48 283 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 SAMD8Q96LT4 415 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 METTL8Q9H825 291 aaKnown RBP7.63□□□□□ -1.19
UBE4B-202ENST00000343090 GORASP2Q9H8Y8 452 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 ATXN7L1Q9ULK2 861 aaPredicted RBP7.63□□□□□ -1.19
UBE4B-202ENST00000343090 LIPT1Q9Y234 373 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 ANKRD36CQ5JPF3 1778 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 TRBV2A0A0J9YWF9 115 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 ZNF878C9JN71 531 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 CDC40O60508 579 aaKnown RBP eCLIP7.63□□□□□ -1.19
UBE4B-202ENST00000343090 GMDSO60547 372 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 SCGB1D2O95969 90 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 PAHP00439 452 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 BMP1P13497 986 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 DRD2P14416 443 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 M6PRP20645 277 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 PSMB5P28074 263 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 NUDT1P36639 197 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 PIGAP37287 484 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 MC3RP41968 323 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 RGS6P49758 472 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 AAK1Q2M2I8 961 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 C6orf132Q5T0Z8 1188 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 TTLL10Q6ZVT0 673 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 PDZD9Q8IXQ8 264 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 TCEAL8Q8IYN2 117 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 CSNK1A1LQ8N752 337 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 LSMEM1Q8N8F7 131 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 CYB561A3Q8NBI2 242 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 OR9A2Q8NGT5 310 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 OR56A3Q8NH54 315 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 SMARCD2Q92925 531 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 SLC46A2Q9BY10 475 aa7.63□□□□□ -1.19
UBE4B-202ENST00000343090 SERINC1Q9NRX5 453 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms