RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 ZNF205O95201 554 aa9.65□□□□□ -0.86
ATXN3-201ENST00000340660 PLGP00747 810 aaPredicted RBP9.65□□□□□ -0.86
ATXN3-201ENST00000340660 ADAP00813 363 aa9.65□□□□□ -0.86
ATXN3-201ENST00000340660 FCGR2AP12318 317 aa9.65□□□□□ -0.86
ATXN3-201ENST00000340660 DDX5P17844 614 aaKnown RBP9.65□□□□□ -0.86
ATXN3-201ENST00000340660 CD40P25942 277 aa9.65□□□□□ -0.86
ATXN3-201ENST00000340660 RAB38P57729 211 aa9.65□□□□□ -0.86
ATXN3-201ENST00000340660 ERVFRD-1P60508 538 aa9.65□□□□□ -0.86
ATXN3-201ENST00000340660 PDK2Q15119 407 aa9.65□□□□□ -0.86
ATXN3-201ENST00000340660 ZNF385BQ569K4 471 aa9.65□□□□□ -0.86
ATXN3-201ENST00000340660 TMEM108Q6UXF1 575 aa9.65□□□□□ -0.86
ATXN3-201ENST00000340660 BHLHA15Q7RTS1 189 aaPredicted RBP9.65□□□□□ -0.86
ATXN3-201ENST00000340660 SLC46A3Q7Z3Q1 461 aa9.65□□□□□ -0.86
ATXN3-201ENST00000340660 CARM1Q86X55 608 aa9.65□□□□□ -0.86
ATXN3-201ENST00000340660 ZNF786Q8N393 782 aa9.65□□□□□ -0.86
ATXN3-201ENST00000340660 NIPA2Q8N8Q9 360 aa9.65□□□□□ -0.86
ATXN3-201ENST00000340660 RACGAP1Q9H0H5 632 aa9.65□□□□□ -0.86
ATXN3-201ENST00000340660 HOOK1Q9UJC3 728 aaKnown RBP9.65□□□□□ -0.86
ATXN3-201ENST00000340660 FBXL2Q9UKC9 423 aa9.65□□□□□ -0.86
ATXN3-201ENST00000340660 CCDC162PA2VCL2 907 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 SYNDIG1LA6NDD5 238 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 LYNX1G3V0Z9 82 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 CYR61O00622 381 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 CTNSO60931 367 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 PSIP1O75475 530 aaKnown RBP9.64□□□□□ -0.87
ATXN3-201ENST00000340660 PRKRAO75569 313 aaKnown RBP9.64□□□□□ -0.87
ATXN3-201ENST00000340660 NDUFA7O95182 113 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 RHOXF2BP0C7M4 288 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 LYNX1P0DP58 116 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 CDH1P12830 882 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 HOXA5P20719 270 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 CLDN20P56880 219 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 EEFSECP57772 596 aaKnown RBP9.64□□□□□ -0.87
ATXN3-201ENST00000340660 PROK1P58294 105 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 SNRPD2P62316 118 aaKnown RBP9.64□□□□□ -0.87
ATXN3-201ENST00000340660 ID2Q02363 134 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 RGS1Q08116 209 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 SEMA3AQ14563 771 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 EBPQ15125 230 aaKnown RBP9.64□□□□□ -0.87
ATXN3-201ENST00000340660 DEPDC1Q5TB30 811 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 SLC9A4Q6AI14 798 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 MFSD12Q6NUT3 480 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 TFAP2EQ6VUC0 442 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 DGAT2L6Q6ZPD8 337 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 PID1Q7Z2X4 250 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 OR2W6PQ8NHA6 318 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 DOK4Q8TEW6 326 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 C20orf173Q96LM9 149 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 METTL7AQ9H8H3 244 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 ASH2LQ9UBL3 628 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 ATP23Q9Y6H3 246 aa9.64□□□□□ -0.87
ATXN3-201ENST00000340660 A0A0G2JMP0 313 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 A0A0X1KG70 313 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 B4DXG7 233 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 J3QLI3 93 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 SHOXO15266 292 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 OR1F1O43749 312 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 LDB3O75112 727 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 ICOSLGO75144 302 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 TFP02787 698 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 PTAFRP25105 342 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 IMPA1P29218 277 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 AGTR1P30556 359 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 SSR1P43307 286 aaKnown RBP9.63□□□□□ -0.87
ATXN3-201ENST00000340660 TBPL1P62380 186 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 STX4Q12846 297 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 ITGADQ13349 1161 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 TCHHL1Q5QJ38 904 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-201ENST00000340660 ADNP2Q6IQ32 1131 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 ADAMTSL5Q6ZMM2 481 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 TAGAPQ8N103 731 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 METTL25Q8N6Q8 603 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 OR4M2Q8NGB6 313 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 GPA33Q99795 319 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 SYT11Q9BT88 431 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 OSBPL11Q9BXB4 747 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 CNTD2Q9H8S5 307 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 PRR13Q9NZ81 148 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 WNK2Q9Y3S1 2297 aa9.63□□□□□ -0.87
ATXN3-201ENST00000340660 PLECQ15149 4684 aaKnown RBP9.63□□□□□ -0.87
ATXN3-201ENST00000340660 A0A0G2JN53 185 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 WI2-2373I1.2A0A1W2PRP0 233 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 CAPN14A8MX76 684 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 CDH16O75309 829 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 FERP16591 822 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 PI3P19957 117 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 ZNF83P51522 516 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 GEMP55040 296 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 LMO4P61968 165 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 BTN3A2P78410 334 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 GBX1Q14549 363 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 GALNT18Q6P9A2 607 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 SLC29A4Q7RTT9 530 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 TBC1D1Q86TI0 1168 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-201ENST00000340660 EXOC3L1Q86VI1 746 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 PRR22Q8IZ63 422 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 ADCY4Q8NFM4 1077 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 WDR60Q8WVS4 1066 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 RAPGEF5Q92565 580 aa9.62□□□□□ -0.87
ATXN3-201ENST00000340660 SIGLEC10Q96LC7 697 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms