RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 ELP4Q96EB1 424 aa15.51■□□□□ 0.07
BRCC3-202ENST00000340647 METTL2AQ96IZ6 378 aaKnown RBP15.51■□□□□ 0.07
BRCC3-202ENST00000340647 BBS4Q96RK4 519 aa15.51■□□□□ 0.07
BRCC3-202ENST00000340647 OR2B2Q9GZK3 357 aa15.51■□□□□ 0.07
BRCC3-202ENST00000340647 GIMAP2Q9UG22 337 aa15.51■□□□□ 0.07
BRCC3-202ENST00000340647 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.51■□□□□ 0.07
BRCC3-202ENST00000340647 BAIAP2L1Q9UHR4 511 aa15.51■□□□□ 0.07
BRCC3-202ENST00000340647 WBP11Q9Y2W2 641 aaKnown RBP15.51■□□□□ 0.07
BRCC3-202ENST00000340647 FIS1Q9Y3D6 152 aa15.51■□□□□ 0.07
BRCC3-202ENST00000340647 V9GYY5 206 aaPredicted RBP15.51■□□□□ 0.07
BRCC3-202ENST00000340647 LSM1O15116 133 aaKnown RBP15.5■□□□□ 0.07
BRCC3-202ENST00000340647 ZIC3O60481 467 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 SEC22BO75396 215 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 LINC00032P0C843 101 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 CYP4B1P13584 511 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 SSTR2P30874 369 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 FRKP42685 505 aaPredicted RBP15.5■□□□□ 0.07
BRCC3-202ENST00000340647 ETV4P43268 484 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 ZNF136P52737 540 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 PNLIPRP2P54317 469 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 GFRA1P56159 465 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 RPP38P78345 283 aaKnown RBP15.5■□□□□ 0.07
BRCC3-202ENST00000340647 TLE4Q04727 773 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 GAB1Q13480 694 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 SNTB1Q13884 538 aaKnown RBP15.5■□□□□ 0.07
BRCC3-202ENST00000340647 PDE7AQ13946 482 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 ARL13AQ5H913 290 aaPredicted RBP15.5■□□□□ 0.07
BRCC3-202ENST00000340647 OR5M10Q6IEU7 315 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 PLXDC2Q6UX71 529 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 ZCCHC23Q6ZST2 131 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 ADGRE4PQ86SQ3 457 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 NUDT8Q8WV74 236 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 C3orf30Q96M34 536 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 LRTM1Q9HBL6 345 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 MCCC2Q9HCC0 563 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 RRAGDQ9NQL2 400 aaPredicted RBP15.5■□□□□ 0.07
BRCC3-202ENST00000340647 GIMAP4Q9NUV9 329 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 C1orf109Q9NX04 203 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 KLRF1Q9NZS2 232 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 L3MBTL1Q9Y468 752 aa15.5■□□□□ 0.07
BRCC3-202ENST00000340647 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 SLC28A1O00337 649 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 TYROBPO43914 113 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 FADS1O60427 444 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 NPHS1O60500 1241 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 IGKV1D-16P01601 117 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 TIMP3P35625 211 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 B3GALT5-AS1P59052 145 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 NSUN5P2Q63ZY6 315 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 WDR93Q6P2C0 686 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 IKBIPQ70UQ0 350 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 LARP4Q71RC2 724 aaKnown RBP eCLIP15.49■□□□□ 0.07
BRCC3-202ENST00000340647 PLCZ1Q86YW0 608 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 RIBC1Q8N443 379 aaPredicted RBP15.49■□□□□ 0.07
BRCC3-202ENST00000340647 CAVIN3Q969G5 261 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 ABTB1Q969K4 478 aaPredicted RBP15.49■□□□□ 0.07
BRCC3-202ENST00000340647 GIMAP5Q96F15 307 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 ZNF764Q96H86 408 aaPredicted RBP15.49■□□□□ 0.07
BRCC3-202ENST00000340647 SH3GL2Q99962 352 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 LMF2Q9BU23 707 aaKnown RBP15.49■□□□□ 0.07
BRCC3-202ENST00000340647 TRMOQ9BU70 441 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 STMN4Q9H169 189 aaPredicted RBP15.49■□□□□ 0.07
BRCC3-202ENST00000340647 TAS2R9Q9NYW1 312 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 WIF1Q9Y5W5 379 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 NF1P21359 2839 aa15.49■□□□□ 0.07
BRCC3-202ENST00000340647 AKAP6Q13023 2319 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 GXYLT2A0PJZ3 443 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 CD8B2A6NJW9 211 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 TBX19O60806 448 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 ABCB7O75027 752 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 CRCPO75575 148 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 CBR3O75828 277 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 CPN1P15169 458 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 STARP49675 285 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 LHX2P50458 406 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 TOMM20Q15388 145 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 ERCC6LQ2NKX8 1250 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 XKR7Q5GH72 579 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 EXOSC6Q5RKV6 272 aaKnown RBP15.48■□□□□ 0.07
BRCC3-202ENST00000340647 APOOLQ6UXV4 268 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 TRIM42Q8IWZ5 723 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 FADS6Q8N9I5 356 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 C9orf106Q8NAJ2 232 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 CLHC1Q8NHS4 586 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 TWIST2Q8WVJ9 160 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 TMCO6Q96DC7 493 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 TSSK3Q96PN8 268 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 TMEM109Q9BVC6 243 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 ROPN1BQ9BZX4 212 aaPredicted RBP15.48■□□□□ 0.07
BRCC3-202ENST00000340647 ROPN1Q9HAT0 212 aaPredicted RBP15.48■□□□□ 0.07
BRCC3-202ENST00000340647 MIEF1Q9NQG6 463 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 NTMQ9P121 344 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 ZDHHC2Q9UIJ5 367 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 CAMK2AQ9UQM7 478 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 TRAF6Q9Y4K3 522 aa15.48■□□□□ 0.07
BRCC3-202ENST00000340647 ZNF469Q96JG9 3925 aaPredicted RBP15.48■□□□□ 0.07
BRCC3-202ENST00000340647 MBD3L4A6NDZ8 208 aaPredicted RBP15.47■□□□□ 0.07
BRCC3-202ENST00000340647 MBD3L3A6NE82 208 aaPredicted RBP15.47■□□□□ 0.07
BRCC3-202ENST00000340647 MBD3L5A6NJ08 208 aaPredicted RBP15.47■□□□□ 0.07
BRCC3-202ENST00000340647 PIP5K1BO14986 540 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms