RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SH3BGRL2Q9UJC5 107 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 NINQ8N4C6 2090 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 TRIM3O75382 744 aaPredicted RBP17.59■□□□□ 0.41
SYNE4-202ENST00000340477 PDE9AO76083 593 aa17.59■□□□□ 0.41
SYNE4-202ENST00000340477 C6orf47O95873 294 aa17.59■□□□□ 0.41
SYNE4-202ENST00000340477 ESRRAP11474 423 aaPredicted RBP17.59■□□□□ 0.41
SYNE4-202ENST00000340477 GABRA3P34903 492 aa17.59■□□□□ 0.41
SYNE4-202ENST00000340477 PTGS2P35354 604 aa17.59■□□□□ 0.41
SYNE4-202ENST00000340477 CA7P43166 264 aa17.59■□□□□ 0.41
SYNE4-202ENST00000340477 HSF1Q00613 529 aa17.59■□□□□ 0.41
SYNE4-202ENST00000340477 BICRALQ6AI39 1079 aa17.59■□□□□ 0.41
SYNE4-202ENST00000340477 ACAD11Q709F0 780 aa17.59■□□□□ 0.41
SYNE4-202ENST00000340477 SFXN5Q8TD22 340 aa17.59■□□□□ 0.41
SYNE4-202ENST00000340477 ACTRT2Q8TDY3 377 aa17.59■□□□□ 0.41
SYNE4-202ENST00000340477 SLC9A6Q92581 669 aa17.59■□□□□ 0.41
SYNE4-202ENST00000340477 TESCQ96BS2 214 aa17.59■□□□□ 0.41
SYNE4-202ENST00000340477 EFHD2Q96C19 240 aaPredicted RBP17.59■□□□□ 0.41
SYNE4-202ENST00000340477 TMEM41AQ96HV5 264 aa17.59■□□□□ 0.41
SYNE4-202ENST00000340477 WDR55Q9H6Y2 383 aaPredicted RBP17.59■□□□□ 0.41
SYNE4-202ENST00000340477 AIG1Q9NVV5 245 aa17.59■□□□□ 0.41
SYNE4-202ENST00000340477 NTMQ9P121 344 aa17.59■□□□□ 0.41
SYNE4-202ENST00000340477 ERRFI1Q9UJM3 462 aaPredicted RBP17.59■□□□□ 0.41
SYNE4-202ENST00000340477 UQCRHLA0A096LP55 91 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 A0A1B0GTH9 108 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 E9PBE3 544 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 TSPAN2O60636 221 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 DIAPH2O60879 1101 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 TPOP07202 933 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 ALOX5P09917 674 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 IDO1P14902 403 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 RFX3P48380 749 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 CCT3P49368 545 aaKnown RBP17.58■□□□□ 0.4
SYNE4-202ENST00000340477 MAN2A2P49641 1150 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 CLK3P49761 638 aaKnown RBP17.58■□□□□ 0.4
SYNE4-202ENST00000340477 TP53BP2Q13625 1128 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 MFSD12Q6NUT3 480 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 ANGPTL8Q6UXH0 198 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 OR8J2Q8NGG1 315 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 OR1J4Q8NGS1 313 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 FAM120BQ96EK7 910 aaKnown RBP17.58■□□□□ 0.4
SYNE4-202ENST00000340477 NODALQ96S42 347 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 PROK2Q9HC23 129 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 FAF1Q9UNN5 650 aaPredicted RBP17.58■□□□□ 0.4
SYNE4-202ENST00000340477 ZNF835Q9Y2P0 537 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 USH1CQ9Y6N9 552 aa17.58■□□□□ 0.4
SYNE4-202ENST00000340477 LRRC3CA6NJW4 275 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 RNASET2O00584 256 aaKnown RBP17.57■□□□□ 0.4
SYNE4-202ENST00000340477 CCL21O00585 134 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 POLR3GO15318 223 aaPredicted RBP17.57■□□□□ 0.4
SYNE4-202ENST00000340477 HCN1O60741 890 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 SOX30O94993 753 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 S100A3P33764 101 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 GCKP35557 465 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 SRSF1Q07955 248 aaKnown RBP eCLIP17.57■□□□□ 0.4
SYNE4-202ENST00000340477 TOMM20Q15388 145 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 OR4F3Q6IEY1 312 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 Q6ZPB1 254 aaPredicted RBP17.57■□□□□ 0.4
SYNE4-202ENST00000340477 WDR53Q7Z5U6 358 aaPredicted RBP17.57■□□□□ 0.4
SYNE4-202ENST00000340477 COX18Q8N8Q8 333 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 OR4N2Q8NGD1 307 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 PSMA8Q8TAA3 256 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 FBXO30Q8TB52 745 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 RELTQ969Z4 430 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 RMND5BQ96G75 393 aaPredicted RBP17.57■□□□□ 0.4
SYNE4-202ENST00000340477 MAELQ96JY0 434 aaKnown RBP17.57■□□□□ 0.4
SYNE4-202ENST00000340477 MAGEB18Q96M61 343 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 PLSCR2Q9NRY7 297 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 SIRT3Q9NTG7 399 aaPredicted RBP17.57■□□□□ 0.4
SYNE4-202ENST00000340477 ABCG2Q9UNQ0 655 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 C15orf41Q9Y2V0 281 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 GTF3C1Q12789 2109 aa17.57■□□□□ 0.4
SYNE4-202ENST00000340477 USP9XQ93008 2570 aaPredicted RBP17.57■□□□□ 0.4
SYNE4-202ENST00000340477 TRGV5A0A0B4J1U4 118 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 OR14I1A6ND48 311 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 GNB5O14775 395 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 BCKDKO14874 412 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 SUSD5O60279 629 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 ICOSLGO75144 302 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 TRAPPC6AO75865 159 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 WISP2O76076 250 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 NKX2-2O95096 273 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 TGDSO95455 350 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 IL33O95760 270 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 IGHG3P01860 377 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 ALDOCP09972 364 aaKnown RBP17.56■□□□□ 0.4
SYNE4-202ENST00000340477 NME5P56597 212 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 GAB1Q13480 694 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 LASP1Q14847 261 aaKnown RBP17.56■□□□□ 0.4
SYNE4-202ENST00000340477 C3AR1Q16581 482 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 GSTA3Q16772 222 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 SLC9B1Q4ZJI4 515 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 TIGD3Q6B0B8 471 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 TRILQ7L0X0 811 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 CD163Q86VB7 1156 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 ARFGAP2Q8N6H7 521 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 GLB1L3Q8NCI6 653 aaPredicted RBP17.56■□□□□ 0.4
SYNE4-202ENST00000340477 OR4A15Q8NGL6 344 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 FAM57AQ8TBR7 257 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 SARAFQ96BY9 339 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 CXorf36Q9H7Y0 433 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms