RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 CCDC115Q96NT0 180 aa13.06□□□□□ -0.32
CTSL-201ENST00000340342 SLX1AQ9BQ83 275 aa13.06□□□□□ -0.32
CTSL-201ENST00000340342 CCDC167Q9P0B6 97 aa13.06□□□□□ -0.32
CTSL-201ENST00000340342 KLF13Q9Y2Y9 288 aaPredicted RBP13.06□□□□□ -0.32
CTSL-201ENST00000340342 RNF103-CHMP3A0A140T963 221 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 CLEC18AA5D8T8 446 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 UGT2B11O75310 529 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 REM1O75628 298 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 IL6P05231 212 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 GABRA3P34903 492 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 MAP3K8P41279 467 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 DNASE1L1P49184 302 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 TMED10P49755 219 aaKnown RBP13.05□□□□□ -0.32
CTSL-201ENST00000340342 ARFIP2P53365 341 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 CASP9P55211 416 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 RPS26P62854 115 aaKnown RBP13.05□□□□□ -0.32
CTSL-201ENST00000340342 MRPL49Q13405 166 aaKnown RBP13.05□□□□□ -0.32
CTSL-201ENST00000340342 UBAP2LQ14157 1087 aaKnown RBP13.05□□□□□ -0.32
CTSL-201ENST00000340342 SQLEQ14534 574 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 DUSP5Q16690 384 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 EIF2S3LQ2VIR3 472 aaKnown RBP13.05□□□□□ -0.32
CTSL-201ENST00000340342 SLC22A10Q63ZE4 541 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 CLEC18BQ6UXF7 455 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 DNAJC14Q6Y2X3 702 aaPredicted RBP13.05□□□□□ -0.32
CTSL-201ENST00000340342 GALNT10Q86SR1 603 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 DND1Q8IYX4 353 aaKnown RBP13.05□□□□□ -0.32
CTSL-201ENST00000340342 FAM26EQ8N5C1 309 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 FAM98AQ8NCA5 519 aaKnown RBP13.05□□□□□ -0.32
CTSL-201ENST00000340342 CLEC18CQ8NCF0 446 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 VPS37AQ8NEZ2 397 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 OR56A1Q8NGH5 318 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 GPR151Q8TDV0 419 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 NR4A3Q92570 626 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 HOXB13Q92826 284 aaPredicted RBP13.05□□□□□ -0.32
CTSL-201ENST00000340342 ADOQ96SZ5 270 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 ZNF385DQ9H6B1 395 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 SERHLQ9NQF3 203 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 SACM1LQ9NTJ5 587 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 GPATCH2Q9NW75 528 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 BTNL2Q9UIR0 455 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 CNOT11Q9UKZ1 510 aaKnown RBP13.05□□□□□ -0.32
CTSL-201ENST00000340342 PCDHGB4Q9UN71 923 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 POLEQ07864 2286 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 ASPDHA6ND91 283 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 CAPN14A8MX76 684 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 NR5A2O00482 541 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 TSPAN2O60636 221 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 WISP2O76076 250 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 P04436 131 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 GSNP06396 782 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 RFX3P48380 749 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 ATP4BP51164 291 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 RCAN2Q14206 197 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 AGKQ53H12 422 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 RNFT1Q5M7Z0 435 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 FBXW8Q8N3Y1 598 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 CDRT4Q8N9R6 151 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 CCDC197Q8NCU1 140 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 OR2M7Q8NG81 312 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 PRR7Q8TB68 274 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 DIO2Q92813 273 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 HGDQ93099 445 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 RMND5BQ96G75 393 aaPredicted RBP13.05□□□□□ -0.32
CTSL-201ENST00000340342 COL21A1Q96P44 957 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 PANX1Q96RD7 426 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 NODALQ96S42 347 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 TSPAN10Q9H1Z9 355 aaPredicted RBP13.05□□□□□ -0.32
CTSL-201ENST00000340342 SERHL2Q9H4I8 314 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 PROK2Q9HC23 129 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 Q9N2J8 555 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 SLC6A13Q9NSD5 602 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 CBLCQ9ULV8 474 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 TRIM33Q9UPN9 1127 aa13.05□□□□□ -0.32
CTSL-201ENST00000340342 PCNX3Q9H6A9 2034 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 GTF3C1Q12789 2109 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 CCDC154A6NI56 674 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 OR6C70A6NIJ9 312 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 KLRC4-KLRK1H3BQV0 150 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 TP53I11O14683 189 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 NKX2-2O95096 273 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 ZIC2O95409 532 aaPredicted RBP13.04□□□□□ -0.32
CTSL-201ENST00000340342 IGKV1D-16P01601 117 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 NAGAP17050 411 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 CAPN3P20807 821 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 CNR1P21554 472 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 MST1P26927 711 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 IL12BP29460 328 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 KRT20P35900 424 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 PRIM2P49643 509 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 VPS26BQ4G0F5 336 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 CYP27C1Q4G0S4 372 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 EXOSC6Q5RKV6 272 aaKnown RBP13.04□□□□□ -0.32
CTSL-201ENST00000340342 SLC2A7Q6PXP3 512 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 BLOC1S3Q6QNY0 202 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 GK5Q6ZS86 529 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 C6orf120Q7Z4R8 191 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 OR5D16Q8NGK9 328 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 GOT1L1Q8NHS2 421 aaPredicted RBP13.04□□□□□ -0.32
CTSL-201ENST00000340342 SPPL2AQ8TCT8 520 aa13.04□□□□□ -0.32
CTSL-201ENST00000340342 C10orf82Q8WW14 230 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms