RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 ZNF630Q2M218 657 aaPredicted RBP16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 ARHGAP11BQ3KRB8 267 aa16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 ERICH5Q6P6B1 374 aa16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 ASRGL1Q7L266 308 aa16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 C16orf62Q7Z3J2 963 aa16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 ZZZ3Q8IYH5 903 aa16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 SLC34A3Q8N130 599 aa16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 OR2T12Q8NG77 320 aa16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 FAM110BQ8TC76 370 aa16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 SLC22A8Q8TCC7 542 aa16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 ZNF354BQ96LW1 612 aa16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 CDCP1Q9H5V8 836 aa16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 LIN28AQ9H9Z2 209 aaKnown RBP16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 CPNE5Q9HCH3 593 aa16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 TEKT2Q9UIF3 430 aa16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 YARS2Q9Y2Z4 477 aaKnown RBP16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 ZNF451Q9Y4E5 1061 aa16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.52■□□□□ 0.23
SDCBP2-201ENST00000339987 KMT2BQ9UMN6 2715 aaPredicted RBP16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 PRAMEF27A3QJZ7 478 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 PRORSD1PA6NEY8 169 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 A8MUI8 341 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 GSC2O15499 205 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 OR2J2O76002 312 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 KCNK2O95069 426 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 NAGAP17050 411 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 SOX11P35716 441 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 FUT5Q11128 374 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 CEACAM7Q14002 265 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 GNA13Q14344 377 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 DECR1Q16698 335 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 MEP1AQ16819 746 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 CRB2Q5IJ48 1285 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 DCST2Q5T1A1 773 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 PRAMEF8Q5VWM4 474 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 PRAMEF7Q5VXH5 474 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 AP1ARQ63HQ0 302 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 C16orf47Q6ZP98 133 aaPredicted RBP16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 SLC30A8Q8IWU4 369 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 SIRT6Q8N6T7 355 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 C11orf65Q8NCR3 313 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 OR4N2Q8NGD1 307 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 SLC38A5Q8WUX1 472 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 RMND5BQ96G75 393 aaPredicted RBP16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 TRNT1Q96Q11 434 aaKnown RBP16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 RASL10BQ96S79 203 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 SDF2Q99470 211 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 THTPAQ9BU02 230 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 CADM1Q9BY67 442 aaKnown RBP16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 PIF1Q9H611 641 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 MRTO4Q9UKD2 239 aaKnown RBP16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 DOCK10Q96BY6 2186 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 IGF2RP11717 2491 aa16.51■□□□□ 0.23
SDCBP2-201ENST00000339987 EPG5Q9HCE0 2579 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 CDK2AP1O14519 115 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 ITGA10O75578 1167 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 CEACAM4O75871 244 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 DNAJB5O75953 348 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 NR2F1P10589 423 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 ABCD3P28288 659 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 HTR1EP28566 365 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 PCGF2P35227 344 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 CDK6Q00534 326 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 PLCXD2Q0VAA5 305 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 MAPK11Q15759 364 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 SYPL1Q16563 259 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 VMACQ2NL98 169 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 ACER2Q5QJU3 275 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 FCRLBQ6BAA4 426 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 LYPD8Q6UX82 237 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 MICU2Q8IYU8 434 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 BCORP1Q8N888 145 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 TNIP2Q8NFZ5 429 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 APOBEC4Q8WW27 367 aaKnown RBP16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 MAL2Q969L2 176 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 TMBIM1Q969X1 311 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 KCTD14Q9BQ13 255 aaPredicted RBP16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 G6PC3Q9BUM1 346 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 MMADHCQ9H3L0 296 aaPredicted RBP16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 POLE3Q9NRF9 147 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 CALML5Q9NZT1 146 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 NPFFR2Q9Y5X5 522 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 MED13Q9UHV7 2174 aa16.5■□□□□ 0.23
SDCBP2-201ENST00000339987 ELOVL7A1L3X0 281 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 SLC28A2O43868 658 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 MAN1A2O60476 641 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 TSPAN2O60636 221 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 ZNF354AO60765 605 aaPredicted RBP16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 IL33O95760 270 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 BCHEP06276 602 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 LCN1P31025 176 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 PGM1P36871 562 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 SSR4P51571 173 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 PSMD4P55036 377 aaKnown RBP16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 SCARB2Q14108 478 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 VEZF1Q14119 521 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 FXNQ16595 210 aa16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 B3GNTL1Q67FW5 361 aaPredicted RBP16.49■□□□□ 0.23
SDCBP2-201ENST00000339987 PGM2L1Q6PCE3 622 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms