RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 VRK3Q8IV63 474 aa8.85□□□□□ -0.99
NECAP1-201ENST00000339754 LRRC56Q8IYG6 542 aaPredicted RBP8.85□□□□□ -0.99
NECAP1-201ENST00000339754 GPR26Q8NDV2 337 aa8.85□□□□□ -0.99
NECAP1-201ENST00000339754 GPR156Q8NFN8 814 aa8.85□□□□□ -0.99
NECAP1-201ENST00000339754 OR4F15Q8NGB8 312 aa8.85□□□□□ -0.99
NECAP1-201ENST00000339754 SCARB1Q8WTV0 552 aa8.85□□□□□ -0.99
NECAP1-201ENST00000339754 KCTD12Q96CX2 325 aaKnown RBP8.85□□□□□ -0.99
NECAP1-201ENST00000339754 ELMOD3Q96FG2 381 aa8.85□□□□□ -0.99
NECAP1-201ENST00000339754 LCORQ96JN0 433 aaPredicted RBP8.85□□□□□ -0.99
NECAP1-201ENST00000339754 PLA2G12AQ9BZM1 189 aa8.85□□□□□ -0.99
NECAP1-201ENST00000339754 CHIAQ9BZP6 476 aa8.85□□□□□ -0.99
NECAP1-201ENST00000339754 ACTR6Q9GZN1 396 aa8.85□□□□□ -0.99
NECAP1-201ENST00000339754 CCSER2Q9H7U1 834 aa8.85□□□□□ -0.99
NECAP1-201ENST00000339754 ZNF275Q9NSD4 429 aaPredicted RBP8.85□□□□□ -0.99
NECAP1-201ENST00000339754 GULP1Q9UBP9 304 aa8.85□□□□□ -0.99
NECAP1-201ENST00000339754 CRLS1Q9UJA2 301 aa8.85□□□□□ -0.99
NECAP1-201ENST00000339754 RASD1Q9Y272 281 aa8.85□□□□□ -0.99
NECAP1-201ENST00000339754 CKAP5Q14008 2032 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 F8W036 122 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 H0YIV9 168 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 GFYI3L273 518 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 SIGLEC6O43699 453 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 NME6O75414 186 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-201ENST00000339754 APOC3P02656 99 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 TFP02787 698 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 MT-ND4P03905 459 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 WNT1P04628 370 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 C8GP07360 202 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 NFYAP23511 347 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-201ENST00000339754 TIA1P31483 386 aaKnown RBP eCLIP8.84□□□□□ -0.99
NECAP1-201ENST00000339754 CDH4P55283 916 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 ARF5P84085 180 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 SHC2P98077 582 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 DGCR2P98153 550 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 PDSS1Q5T2R2 415 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 B3GNTL1Q67FW5 361 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-201ENST00000339754 DEF8Q6ZN54 512 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 MRGPREQ86SM8 312 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 MCATQ8IVS2 390 aaKnown RBP8.84□□□□□ -0.99
NECAP1-201ENST00000339754 NXPE1Q8N323 547 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 POGLUT1Q8NBL1 392 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 OR8K3Q8NH51 312 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 OR1S1Q8NH92 325 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 SPRYD4Q8WW59 207 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-201ENST00000339754 THAP4Q8WY91 577 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 CXorf40BQ96DE9 158 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 SUSD3Q96L08 255 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 ESRP2Q9H6T0 727 aaKnown RBP8.84□□□□□ -0.99
NECAP1-201ENST00000339754 BRF2Q9HAW0 419 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 ZFYVE1Q9HBF4 777 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 SLC39A1Q9NY26 324 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 KLHL42Q9P2K6 505 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 RPS6KB2Q9UBS0 482 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 MBD1Q9UIS9 605 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-201ENST00000339754 A4GNTQ9UNA3 340 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 ST3GAL5Q9UNP4 418 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 MANSC4A6NHS7 340 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-201ENST00000339754 KDM4EB2RXH2 506 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-201ENST00000339754 E7EQ34 232 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 PEX14O75381 377 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 CLDN7O95471 211 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 FURINP09958 794 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 HSD3B2P26439 372 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 SHC1P29353 583 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 VIPR1P32241 457 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 MMP15P51511 669 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 SIM1P81133 766 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-201ENST00000339754 B4GALNT1Q00973 533 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 E2F1Q01094 437 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 SCRN3Q0VDG4 424 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 CRHR2Q13324 411 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 SP140Q13342 867 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 PIN1Q13526 163 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-201ENST00000339754 LTB4RQ15722 352 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 CDKN3Q16667 212 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 ZNF791Q3KP31 576 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-201ENST00000339754 RNASE12Q5GAN4 147 aaKnown RBP8.84□□□□□ -0.99
NECAP1-201ENST00000339754 SLC30A6Q6NXT4 461 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 DOCK3Q8IZD9 2030 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 HORMAD2Q8N7B1 307 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 HAVCR2Q8TDQ0 301 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 SLC38A5Q8WUX1 472 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 MRPS31Q92665 395 aaKnown RBP8.84□□□□□ -0.99
NECAP1-201ENST00000339754 WDR89Q96FK6 387 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-201ENST00000339754 DCBLD2Q96PD2 775 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 SLC38A3Q99624 504 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 SEC22CQ9BRL7 303 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 EVA1AQ9H8M9 152 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 EMC3Q9P0I2 261 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 LHX3Q9UBR4 397 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 FLVCR2Q9UPI3 526 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 CA5BQ9Y2D0 317 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 KCNK7Q9Y2U2 307 aa8.84□□□□□ -0.99
NECAP1-201ENST00000339754 SIRT4Q9Y6E7 314 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-201ENST00000339754 GSAPA4D1B5 854 aa8.83□□□□□ -1
NECAP1-201ENST00000339754 TRABD2BA6NFA1 517 aa8.83□□□□□ -1
NECAP1-201ENST00000339754 AGAP14A8MT82 685 aa8.83□□□□□ -1
NECAP1-201ENST00000339754 D6RAR5 112 aa8.83□□□□□ -1
NECAP1-201ENST00000339754 SIGLEC5O15389 551 aa8.83□□□□□ -1
NECAP1-201ENST00000339754 GALR3O60755 368 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms