RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 ZNF471Q9BX82 626 aaPredicted RBP7.32□□□□□ -1.24
TRIM2-201ENST00000338700 MTMR10Q9NXD2 777 aa7.32□□□□□ -1.24
TRIM2-201ENST00000338700 KLHL42Q9P2K6 505 aa7.32□□□□□ -1.24
TRIM2-201ENST00000338700 PCDHGA6Q9Y5G7 932 aa7.32□□□□□ -1.24
TRIM2-201ENST00000338700 TRBV2A0A0J9YWF9 115 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 hCG_1807616A0A1W2PRN6 198 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 SLC33A1O00400 549 aaPredicted RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 YKT6O15498 198 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 GNRHRP30968 328 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 AFF1P51825 1210 aaKnown RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 ZNF140P52738 457 aaPredicted RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 SIX1Q15475 284 aaPredicted RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 PLEKHN1Q494U1 663 aaPredicted RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 SFT2D3Q587I9 215 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 CEACAM19Q7Z692 300 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 WDR20Q8TBZ3 569 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 CCNL2Q96S94 520 aaPredicted RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 WACQ9BTA9 647 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 TMEM45AQ9NWC5 275 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 CPNE7Q9UBL6 633 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 BTNL2Q9UIR0 455 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 KCNIP3Q9Y2W7 256 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 RDH16O75452 317 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 SCGB2A1O75556 95 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 JRKO75564 520 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 SNAPC5O75971 98 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 GKN3PP0CG01 181 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 LAMP1P11279 417 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 CELP19835 753 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 DDCP20711 480 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 RBMXP38159 391 aaKnown RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 ZNF45Q02386 682 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 KCTD9Q7L273 389 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 ZNF551Q7Z340 670 aaPredicted RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 ABHD12BQ7Z5M8 362 aaPredicted RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 OR8S1Q8NH09 359 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 NEIL3Q8TAT5 605 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 AKAP1Q92667 903 aaKnown RBP eCLIP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 TCEAL3Q969E4 200 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 FAM46AQ96IP4 442 aaKnown RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 SFXN2Q96NB2 322 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 ZNF701Q9NV72 531 aaPredicted RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 SLC39A1Q9NY26 324 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 ADAM18Q9Y3Q7 739 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 USP3Q9Y6I4 520 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 TIAM2Q8IVF5 1701 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 SLC9B1P1A6NJY1 282 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 BCAT2O15382 392 aaPredicted RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 VNN2O95498 520 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 ELK4P28324 431 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 GJA4P35212 333 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 PRPS1P60891 318 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 BOLLQ8N9W6 283 aaKnown RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 OR6C2Q9NZP2 312 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 CXXC1Q9P0U4 656 aaPredicted RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 AP1M2Q9Y6Q5 423 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 A6NIZ1 184 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 IGHEP01854 428 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 GSTT2P0CG29 244 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 DAP3P51398 398 aaKnown RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 PGGT1BP53609 377 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 CTXN1P60606 82 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 RAP1BP61224 184 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 YPEL5P62699 121 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 RAP1AP62834 184 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 TLE3Q04726 772 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 TLDC1Q6P9B6 456 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 CDHR3Q6ZTQ4 885 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 SHFQ7M4L6 423 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 OR7G3Q8NG95 312 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 OR9A2Q8NGT5 310 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 PINK1Q9BXM7 581 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 CFHR5Q9BXR6 569 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 NELFAQ9H3P2 528 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 MYH4Q9Y623 1939 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 TAF1P21675 1872 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 FXYD6-FXYD2A0A087WZ82 144 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 A0A0A6YYC8 382 aaPredicted RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 I3L1I5 382 aaPredicted RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 M0R129 80 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 RNASET2O00584 256 aaKnown RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 SSX5O60225 188 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 UBL4AP11441 157 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 CKMT1AP12532 417 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 TRA2BP62995 288 aaKnown RBP7.31□□□□□ -1.24
TRIM2-201ENST00000338700 BNIP3Q12983 259 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 RGNQ15493 299 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 SYCE2Q6PIF2 218 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 DCDC5Q6ZRR9 648 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 VWA5B2Q8N398 1253 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 METTL25Q8N6Q8 603 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 ZNF709Q8N972 641 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 CNIH3Q8TBE1 160 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 ABHD5Q8WTS1 349 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 SPTSSAQ969W0 71 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 FXYD6Q9H0Q3 95 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 LRIT1Q9P2V4 623 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 ACAD8Q9UKU7 415 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 PCDHA9Q9Y5H5 950 aa7.31□□□□□ -1.24
TRIM2-201ENST00000338700 RNF215Q9Y6U7 377 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms