RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 PLD6Q8N2A8 252 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 PSD4Q8NDX1 1056 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 NUDT10Q8NFP7 164 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR1J1Q8NGS3 322 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR4K15Q8NH41 348 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR5AK3PQ8NH89 298 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 USB1Q9BQ65 265 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF696Q9H7X3 374 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 CACNG4Q9UBN1 327 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 TNRC6AQ8NDV7 1962 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 ANKRD31Q8N7Z5 1873 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 INSIG1O15503 277 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 CNIH1O95406 144 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 HLA-DPB1P04440 258 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 CCR6P51684 374 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 ENDOGQ14249 297 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 SLC39A14Q15043 492 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 HSF5Q4G112 596 aaPredicted RBP5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 HS3ST5Q8IZT8 346 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 PPP1R35Q8TAP8 253 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 IL20RAQ9UHF4 553 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 NENFQ9UMX5 172 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 HEMK1Q9Y5R4 338 aaPredicted RBP5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 A0A087X0T9 212 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 GSC2O15499 205 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 C6orf47O95873 294 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 GSRP00390 522 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 CKMT2P17540 419 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 PNPLA4P41247 253 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 GYG1P46976 350 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 HSPA7P48741 367 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 B2MP61769 119 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 SF3A2Q15428 464 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 LYSMD3Q7Z3D4 306 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 NXPE1Q8N323 547 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 FBXO22Q8NEZ5 403 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 HMGB4Q8WW32 186 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 RNF157Q96PX1 679 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 BCAS3Q9H6U6 928 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 SLC28A3Q9HAS3 691 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 CCM2LQ9NUG4 571 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 PI4KAP42356 2102 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 PPRC1Q5VV67 1664 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 C5orf60A6NFR6 353 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 DBX1A6NMT0 343 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 SOCS7O14512 581 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF217O75362 1048 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 GLSO94925 669 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 HLA-DQB2P05538 268 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 MTHFD2P13995 350 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 INSRRP14616 1297 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 HOXA13P31271 388 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 GSTM4Q03013 218 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 ABHD13Q7L211 337 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 UBALD2Q8IYN6 164 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR6K6Q8NGW6 343 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 C2CD4CQ8TF44 421 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 CD101Q93033 1021 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 UBE2E3Q969T4 207 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 MCHR2Q969V1 340 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 CHFRQ96EP1 664 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 C5orf34Q96MH7 638 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 TMEM121BQ9BXQ6 578 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 GBA3Q9H227 469 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 TP63Q9H3D4 680 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 PLEKHA3Q9HB20 300 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 POLR1DQ9Y2S0 133 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 A0A1W2PN81 502 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 RFPL4AA6NLU0 287 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 RFPL4AL1F8VTS6 287 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 SYN3O14994 580 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 CHRNA7P36544 502 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 DNASE1L1P49184 302 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 PSEN2P49810 448 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 CLCNKAP51800 687 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 PRAMEF19Q5SWL8 479 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 BTNL8Q6UX41 500 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 TMEM130Q8N3G9 435 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 EIF4E3Q8N5X7 224 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 PPTC7Q8NI37 304 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 SFXN2Q96NB2 322 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 PMCHL2Q9BQD1 86 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 HES7Q9BYE0 225 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 AP5M1Q9H0R1 490 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR51M1Q9H341 326 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 PCDHB1Q9Y5F3 818 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 A0A0A6YYK5 440 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 H7BY64 318 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR8U9P0C7N5 309 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 UGT2B7P16662 529 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 IRS1P35568 1242 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 SOX3P41225 446 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 CD86P42081 329 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 TMEM249Q2WGJ8 235 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 FAM209BQ5JX69 171 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 PRPF38BQ5VTL8 546 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 LIPNQ5VXI9 398 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 NAPEPLDQ6IQ20 393 aa5.79□□□□□ -1.48
CDC42BPA-201ENST00000334218 SSX8Q7RTT4 187 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms