RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 POPDC3Q9HBV1 291 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 CXXC1Q9P0U4 656 aaPredicted RBP9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 PUS1Q9Y606 427 aaKnown RBP eCLIP9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 USP31Q70CQ4 1352 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 A0A1W2PQ67 120 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 MEIS3P2A8K0S8 358 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 FOXO6A8MYZ6 492 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 ANKRD63C9JTQ0 380 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 CLDN5O00501 218 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 BMP4P12644 408 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 ENGP17813 658 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 S1PR1P21453 382 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 GABRA5P31644 462 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 HOXA1P49639 335 aaPredicted RBP9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 OC90Q02509 493 aaPredicted RBP9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 ZNF33AQ06730 810 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 BCL7AQ4VC05 210 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 CEACAM19Q7Z692 300 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 TP53TG5Q9Y2B4 290 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 TMEM14AQ9Y6G1 99 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 UBR2Q8IWV8 1755 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 ZNF487B1APH4 448 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 IRF2P14316 349 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 SOX2P48431 317 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 FAM214AQ32MH5 1076 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 SIDT2Q8NBJ9 832 aaKnown RBP9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 OR13C2Q8NGS9 318 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 EFCAB11Q9BUY7 163 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 INPP5EQ9NRR6 644 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 NALCNQ8IZF0 1738 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 SLC22A31A6NKX4 558 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 J3KR12 359 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 CDK14O94921 469 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 OR4F21O95013 312 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 GTDC1Q4AE62 458 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 CST9LP1Q5W188 147 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 FIGNL1Q6PIW4 674 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 HHIPL2Q6UWX4 724 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 CYS1Q717R9 158 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 NFKBIDQ8NI38 313 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 ZBTB8AQ96BR9 441 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 CDK15Q96Q40 435 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 FTHL17Q9BXU8 183 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 IL20RAQ9UHF4 553 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 SCML2Q9UQR0 700 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 SLC27A5Q9Y2P5 690 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 LATO43561 262 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 RAB40ALP0C0E4 278 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 CSF2RAP15509 400 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 TMEM11P17152 192 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 FAM86B1Q8N7N1 296 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 CCDC71LQ8N9Z2 235 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 RAB40AQ8WXH6 277 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 SLC25A51Q9H1U9 297 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 SLAMF7Q9NQ25 335 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 NLE1Q9NVX2 485 aaPredicted RBP9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 DCAF16Q9NXF7 216 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 EPHA6Q9UF33 1036 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 DKKL1Q9UK85 242 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 RPH3ALQ9UNE2 315 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 NFASCO94856 1347 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 INSRRP14616 1297 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 APOFQ13790 326 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 RNASE10Q5GAN6 216 aaKnown RBP9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 NDUFAF7Q7L592 441 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 GPR152Q8TDT2 470 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 PHPT1Q9NRX4 125 aaPredicted RBP9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 OR5H15A6NDH6 313 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 OR5H14A6NHG9 310 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 OR5H1A6NKK0 313 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 A8MUA0 341 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 SLC31A2O15432 143 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 CBSLP0DN79 551 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 CBSP35520 551 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 MTNR1AP48039 350 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 P2RX1P51575 399 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 B3GNT7Q8NFL0 401 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 SLC35B2Q8TB61 432 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 GNPDA2Q8TDQ7 276 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 TMEM18Q96B42 140 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 SEMA6CQ9H3T2 930 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 SRMSQ9H3Y6 488 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 MYOZ2Q9NPC6 264 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 TMEM2Q9UHN6 1383 aa9.86□□□□□ -0.83
SPTBN1-201ENST00000333896 EDNRBP24530 442 aa9.85□□□□□ -0.83
SPTBN1-201ENST00000333896 HTR2CP28335 458 aa9.85□□□□□ -0.83
SPTBN1-201ENST00000333896 FCER1GP30273 86 aa9.85□□□□□ -0.83
SPTBN1-201ENST00000333896 GABRA2P47869 451 aa9.85□□□□□ -0.83
SPTBN1-201ENST00000333896 CCR8P51685 355 aa9.85□□□□□ -0.83
SPTBN1-201ENST00000333896 GTF2A2P52657 109 aa9.85□□□□□ -0.83
SPTBN1-201ENST00000333896 IRF5Q13568 498 aa9.85□□□□□ -0.83
SPTBN1-201ENST00000333896 PTPRRQ15256 657 aa9.85□□□□□ -0.83
SPTBN1-201ENST00000333896 PRSS42Q7Z5A4 293 aa9.85□□□□□ -0.83
SPTBN1-201ENST00000333896 SERPINA12Q8IW75 414 aa9.85□□□□□ -0.83
SPTBN1-201ENST00000333896 C12orf29Q8N999 325 aa9.85□□□□□ -0.83
SPTBN1-201ENST00000333896 OR5H2Q8NGV7 314 aa9.85□□□□□ -0.83
SPTBN1-201ENST00000333896 OR1S1Q8NH92 325 aa9.85□□□□□ -0.83
SPTBN1-201ENST00000333896 BACE2Q9Y5Z0 518 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms