RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 FGD2Q7Z6J4 655 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 MRGPRGQ86SM5 289 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 OR4N5Q8IXE1 308 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 MREGQ8N565 214 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 C1orf52Q8N6N3 182 aaKnown RBP5.81□□□□□ -1.48
SMG1-201ENST00000330588 CDYL2Q8N8U2 506 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.81□□□□□ -1.48
SMG1-201ENST00000330588 METTL6Q8TCB7 284 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 SPPL2AQ8TCT8 520 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 RNF138Q8WVD3 245 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 UBLCP1Q8WVY7 318 aaPredicted RBP5.81□□□□□ -1.48
SMG1-201ENST00000330588 C17orf50Q8WW18 174 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 SARAFQ96BY9 339 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 TMEM41AQ96HV5 264 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 ZNF597Q96LX8 424 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 BTBD9Q96Q07 612 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 CNPPD1Q9BV87 410 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 TMEM109Q9BVC6 243 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 ANGPTL4Q9BY76 406 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 OR10A5Q9H207 317 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 ZNF703Q9H7S9 590 aaPredicted RBP5.81□□□□□ -1.48
SMG1-201ENST00000330588 MYNNQ9NPC7 610 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 FARSBQ9NSD9 589 aaKnown RBP5.81□□□□□ -1.48
SMG1-201ENST00000330588 OXSMQ9NWU1 459 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 MAT2BQ9NZL9 334 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 SENP1Q9P0U3 644 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 B4GALT7Q9UBV7 327 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 CGGBP1Q9UFW8 167 aaPredicted RBP5.81□□□□□ -1.48
SMG1-201ENST00000330588 CNOT11Q9UKZ1 510 aaKnown RBP5.81□□□□□ -1.48
SMG1-201ENST00000330588 TMCC3Q9ULS5 477 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 NPFFR2Q9Y5X5 522 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 ZNF780BQ9Y6R6 833 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.81□□□□□ -1.48
SMG1-201ENST00000330588 HIVEP3Q5T1R4 2406 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 TENM4Q6N022 2769 aa5.81□□□□□ -1.48
SMG1-201ENST00000330588 A0A1B0GTH9 108 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 ERICH4A6NGS2 130 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 WASHC1A8K0Z3 465 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 CYSRT1A8MQ03 144 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 ETV2O00321 342 aaPredicted RBP5.8□□□□□ -1.48
SMG1-201ENST00000330588 PPP6CO00743 305 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 COPEO14579 308 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 HS6ST1O60243 411 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 PCDH7O60245 1069 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 NPHS1O60500 1241 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 ZNF354AO60765 605 aaPredicted RBP5.8□□□□□ -1.48
SMG1-201ENST00000330588 SH3BGRLO75368 114 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 PRKRAO75569 313 aaKnown RBP5.8□□□□□ -1.48
SMG1-201ENST00000330588 PPM1BO75688 479 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 SNUPNO95149 360 aaKnown RBP5.8□□□□□ -1.48
SMG1-201ENST00000330588 CPA3P15088 417 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 DDX5P17844 614 aaKnown RBP5.8□□□□□ -1.48
SMG1-201ENST00000330588 KRT15P19012 456 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 DDCP20711 480 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 MPIP34949 423 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 PPICP45877 212 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 RAE1P78406 368 aaKnown RBP5.8□□□□□ -1.48
SMG1-201ENST00000330588 MGAT2Q10469 447 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 SLC10A1Q14973 349 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 ZNF750Q32MQ0 723 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 NHSL2Q5HYW2 709 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 SLC30A6Q6NXT4 461 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 RPS27LQ71UM5 84 aaKnown RBP5.8□□□□□ -1.48
SMG1-201ENST00000330588 TRILQ7L0X0 811 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 NUP54Q7Z3B4 507 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 ZGRF1Q86YA3 2104 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 KIRREL3Q8IZU9 778 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 TMEM251Q8N6I4 163 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 NEIL3Q8TAT5 605 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 CAVIN3Q969G5 261 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 PPWD1Q96BP3 646 aaKnown RBP5.8□□□□□ -1.48
SMG1-201ENST00000330588 KLHL29Q96CT2 875 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 MTFMTQ96DP5 389 aaKnown RBP5.8□□□□□ -1.48
SMG1-201ENST00000330588 APOPT1Q96IL0 206 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 FCRL1Q96LA6 429 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 ZIM3Q96PE6 472 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 CCT7Q99832 543 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 ANKZF1Q9H8Y5 726 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 PROK2Q9HC23 129 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 GIMAP4Q9NUV9 329 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 PRR13Q9NZ81 148 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 COQ3Q9NZJ6 369 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 TINAGQ9UJW2 476 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 TMED5Q9Y3A6 229 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 MRPS18CQ9Y3D5 142 aaKnown RBP5.8□□□□□ -1.48
SMG1-201ENST00000330588 EXPH5Q8NEV8 1989 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 GNG14A0A1W2PPG7 69 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 A0A1W2PPM1 405 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 A1L4Q6 167 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 PINLYPA6NC86 204 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 LRRC3CA6NJW4 275 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 GLOD5A6NK44 160 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 FOXO6A8MYZ6 492 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 PRSS44E7EML9 344 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 GOLGA8RI6L899 631 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 HRKO00198 91 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 SLC28A1O00337 649 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 PLOD2O00469 737 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 TRIM13O60858 407 aa5.8□□□□□ -1.48
SMG1-201ENST00000330588 WISP2O76076 250 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms