RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 ERMAPQ96PL5 475 aaPredicted RBP13.53□□□□□ -0.24
SYNGR1-203ENST00000328933 HDHD2Q9H0R4 259 aa13.53□□□□□ -0.24
SYNGR1-203ENST00000328933 TPK1Q9H3S4 243 aa13.53□□□□□ -0.24
SYNGR1-203ENST00000328933 SDR39U1Q9NRG7 319 aaPredicted RBP13.53□□□□□ -0.24
SYNGR1-203ENST00000328933 UBQLN4Q9NRR5 601 aa13.53□□□□□ -0.24
SYNGR1-203ENST00000328933 POMT2Q9UKY4 750 aa13.53□□□□□ -0.24
SYNGR1-203ENST00000328933 TRBV5-4A0A0C4DH59 114 aa13.52□□□□□ -0.24
SYNGR1-203ENST00000328933 PFDN1O60925 122 aa13.52□□□□□ -0.24
SYNGR1-203ENST00000328933 SSTR4P31391 388 aa13.52□□□□□ -0.24
SYNGR1-203ENST00000328933 HSD17B7P56937 341 aa13.52□□□□□ -0.24
SYNGR1-203ENST00000328933 DEFA1P59665 94 aa13.52□□□□□ -0.24
SYNGR1-203ENST00000328933 DEFA3P59666 94 aa13.52□□□□□ -0.24
SYNGR1-203ENST00000328933 PPP3R1P63098 170 aa13.52□□□□□ -0.24
SYNGR1-203ENST00000328933 TLE3Q04726 772 aa13.52□□□□□ -0.24
SYNGR1-203ENST00000328933 RPS26P11Q5JNZ5 115 aaPredicted RBP13.52□□□□□ -0.24
SYNGR1-203ENST00000328933 KRT77Q7Z794 578 aa13.52□□□□□ -0.24
SYNGR1-203ENST00000328933 L3MBTL4Q8NA19 623 aa13.52□□□□□ -0.24
SYNGR1-203ENST00000328933 DUSP19Q8WTR2 217 aa13.52□□□□□ -0.24
SYNGR1-203ENST00000328933 GUCD1Q96NT3 240 aa13.52□□□□□ -0.24
SYNGR1-203ENST00000328933 DCUN1D5Q9BTE7 237 aa13.52□□□□□ -0.24
SYNGR1-203ENST00000328933 SPTBP11277 2137 aa13.52□□□□□ -0.24
SYNGR1-203ENST00000328933 ARHGEF9O43307 516 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 SMSP52788 366 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 RASGEF1BQ0VAM2 473 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 KRR1Q13601 381 aaKnown RBP13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 LTB4RQ15722 352 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 EXT1Q16394 746 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 DCST2Q5T1A1 773 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 PRAMEF17Q5VTA0 474 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 FAM180AQ6UWF9 173 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 TMEM207Q6UWW9 146 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 WDR5BQ86VZ2 330 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 SLC15A3Q8IY34 581 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 DHRS4Q9BTZ2 278 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 COMMD4Q9H0A8 199 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 OAZ3Q9UMX2 235 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 OR7A17O14581 309 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 MPZL2O60487 215 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 FMO6PO60774 539 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 DDAH2O95865 285 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 PRKACGP22612 351 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 EEF1A1P68104 462 aaKnown RBP13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 TPRG1LQ5T0D9 272 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 NAXEQ8NCW5 288 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 TMBIM1Q969X1 311 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 LINC00615Q96LM1 132 aaPredicted RBP13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 NKIRAS2Q9NYR9 191 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 LUZP4Q9P127 313 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 PIEZO1Q92508 2521 aa13.52□□□□□ -0.25
SYNGR1-203ENST00000328933 CCDC163A0A0D9SF12 145 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 PDLIM1O00151 329 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 FPR1P21462 350 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 FAM199XQ6PEV8 388 aaPredicted RBP13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 MAMDC2Q7Z304 686 aaPredicted RBP13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 OR1J4Q8NGS1 313 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 OR2A1Q8NGT9 310 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 NR4A3Q92570 626 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 ZNF419Q96HQ0 510 aaPredicted RBP13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 WDR83Q9BRX9 315 aaKnown RBP13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 SRA1Q9HD15 236 aaKnown RBP13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 PARP14Q460N5 1801 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 TSPAN11A1L157 253 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 PROM1O43490 865 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 GALR3O60755 368 aaPredicted RBP13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 CAPN3P20807 821 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 CHAF1BQ13112 559 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 ARMC4Q5T2S8 1044 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 BTN2A1Q7KYR7 527 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 DDIT4LQ96D03 193 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 RNASET2O00584 256 aaKnown RBP13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 TAPBPO15533 448 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 TLX2O43763 284 aaPredicted RBP13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 SNNO75324 88 aaPredicted RBP13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 NSA2O95478 260 aaKnown RBP13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 GKN3PP0CG01 181 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 TEAD1P28347 426 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 ARFIP1P53367 373 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 B4GALNT1Q00973 533 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 RHAGQ02094 409 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 CHRNEQ04844 493 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 OR1N1Q8NGS0 311 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 GAL3ST1Q99999 423 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 CARD8Q9Y2G2 431 aa13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 TDRD6O60522 2096 aaKnown RBP13.51□□□□□ -0.25
SYNGR1-203ENST00000328933 LRIT2A6NDA9 550 aa13.5□□□□□ -0.25
SYNGR1-203ENST00000328933 PSMD9O00233 223 aa13.5□□□□□ -0.25
SYNGR1-203ENST00000328933 SOCS2O14508 198 aa13.5□□□□□ -0.25
SYNGR1-203ENST00000328933 RANBP1P43487 201 aa13.5□□□□□ -0.25
SYNGR1-203ENST00000328933 RGNQ15493 299 aa13.5□□□□□ -0.25
SYNGR1-203ENST00000328933 LIX1LQ8IVB5 337 aa13.5□□□□□ -0.25
SYNGR1-203ENST00000328933 OR8H2Q8N162 312 aa13.5□□□□□ -0.25
SYNGR1-203ENST00000328933 RBM24Q9BX46 236 aaKnown RBP13.5□□□□□ -0.25
SYNGR1-203ENST00000328933 KLHL31Q9H511 634 aa13.5□□□□□ -0.25
SYNGR1-203ENST00000328933 CCDC86Q9H6F5 360 aaKnown RBP13.5□□□□□ -0.25
SYNGR1-203ENST00000328933 NFKBIL1Q9UBC1 381 aaPredicted RBP13.5□□□□□ -0.25
SYNGR1-203ENST00000328933 DAPP1Q9UN19 280 aa13.5□□□□□ -0.25
SYNGR1-203ENST00000328933 SSR3Q9UNL2 185 aa13.5□□□□□ -0.25
SYNGR1-203ENST00000328933 ZNF451Q9Y4E5 1061 aa13.5□□□□□ -0.25
SYNGR1-203ENST00000328933 ZNF318Q5VUA4 2279 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms