RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 GPIP06744 558 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 GUSBP08236 651 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 HNRNPCL4P0DMR1 293 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 DRD5P21918 477 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 CRYBA2P53672 197 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 PSPHP78330 225 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 MRPS22P82650 360 aaKnown RBP9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 PUM1Q14671 1186 aaKnown RBP eCLIP9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 HLA-DQA1Q5Y7H0 255 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 AAGABQ6PD74 315 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 NDUFAF7Q7L592 441 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 GALNT10Q86SR1 603 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 RAB43Q86YS6 212 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 ADGRG5Q8IZF4 528 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 ZNF441Q8N8Z8 693 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 ZSCAN1Q8NBB4 408 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 C17orf47Q8NEP4 570 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 ADIPOR1Q96A54 375 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 TAMM41Q96BW9 452 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 VPS50Q96JG6 964 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 IMMP1LQ96LU5 166 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 SLC38A1Q9H2H9 487 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 RPS6KA6Q9UK32 745 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 SAMD4AQ9UPU9 718 aaKnown RBP9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 TRBV11-1A0A0K0K1C0 115 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 DHRS12A0PJE2 317 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 TRABD2BA6NFA1 517 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 KCNK2O95069 426 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 UMPSP11172 480 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 ETS2P15036 469 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 PIGAP37287 484 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 RNF4P78317 190 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 RIPK1Q13546 671 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 IL10RAQ13651 578 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 TBC1D25Q3MII6 688 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 CYBRD1Q53TN4 286 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 PLAG1Q6DJT9 500 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 HSDL2Q6YN16 418 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 CBLL1Q75N03 491 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 MRGPREQ86SM8 312 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 KRT73Q86Y46 540 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 NUBPLQ8TB37 319 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 M1APQ8TC57 530 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 RMND5BQ96G75 393 aaPredicted RBP9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 LCORQ96JN0 433 aaPredicted RBP9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 GAL3ST4Q96RP7 486 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 ZNF607Q96SK3 696 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 SDF2Q99470 211 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 NXF5Q9H1B4 397 aaKnown RBP9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 GPN2Q9H9Y4 310 aaPredicted RBP9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 ANAPC2Q9UJX6 822 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 GPC6Q9Y625 555 aaPredicted RBP9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 NSG1A0A0A6YYJ2 146 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 TO15178 435 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 KIAA0513O60268 411 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 KRT36O76013 467 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 ZIC2O95409 532 aaPredicted RBP9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 HPP00738 406 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 PSMA4P25789 261 aaKnown RBP9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 NNATQ16517 81 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 CYP27C1Q4G0S4 372 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 CCNJQ5T5M9 372 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 IRAK1BP1Q5VVH5 260 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 ZFP1Q6P2D0 407 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 FRRS1Q6ZNA5 592 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 EIF3MQ7L2H7 374 aaKnown RBP9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 OLIG3Q7RTU3 272 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 FAM110BQ8TC76 370 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 ELP5Q8TE02 316 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 SAP130Q9H0E3 1048 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 S100A14Q9HCY8 104 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 MMP25Q9NPA2 562 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 ADPRHL2Q9NX46 363 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 IL17BQ9UHF5 180 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 ANGPTL2Q9UKU9 493 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 CBLCQ9ULV8 474 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 WASF3Q9UPY6 502 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 WDR45Q9Y484 360 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 OR10H1Q9Y4A9 318 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 MRPS18BQ9Y676 258 aaKnown RBP9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 CFAP54Q96N23 3096 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 M0QX08 132 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 ACOX3O15254 700 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 STX11O75558 287 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 ZNF682O95780 498 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 SLC7A1P30825 629 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 CHRNEQ04844 493 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 BTBD16Q32M84 506 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 AP1ARQ63HQ0 302 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 TYW3Q6IPR3 259 aaKnown RBP9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 ENPP6Q6UWR7 440 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 ZNF619Q8N2I2 560 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 FAM86B1Q8N7N1 296 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 OR4N2Q8NGD1 307 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 ADAMTS17Q8TE56 1095 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 CANT1Q8WVQ1 401 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 PYDC1Q8WXC3 89 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 PMM1Q92871 262 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 TP53INP1Q96A56 240 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms