RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 CHCHD2Q9Y6H1 151 aaPredicted RBP11.96□□□□□ -0.49
SYCN-201ENST00000318438 OR10H2O60403 315 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 GUCY1B2O75343 617 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 ULK1O75385 1050 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 RCBTB2O95199 551 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 SLC35E2P0CK97 266 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 IDUAP35475 653 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 CDK9P50750 372 aaKnown RBP11.95□□□□□ -0.5
SYCN-201ENST00000318438 IFFO1Q0D2I5 559 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 EIPR1Q53HC9 387 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 FAM219BQ5XKK7 198 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 LYPD8Q6UX82 237 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 DGAT2L6Q6ZPD8 337 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 FRMD7Q6ZUT3 714 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 C22orf34Q6ZV56 151 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 C4orf33Q8N1A6 199 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 CCNYL1Q8N7R7 359 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 NUBPLQ8TB37 319 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 ABTB1Q969K4 478 aaPredicted RBP11.95□□□□□ -0.5
SYCN-201ENST00000318438 PPWD1Q96BP3 646 aaKnown RBP11.95□□□□□ -0.5
SYCN-201ENST00000318438 SPACA9Q96E40 222 aaPredicted RBP11.95□□□□□ -0.5
SYCN-201ENST00000318438 SENP5Q96HI0 755 aaPredicted RBP11.95□□□□□ -0.5
SYCN-201ENST00000318438 APOPT1Q96IL0 206 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 ZNF597Q96LX8 424 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 ZFP3Q96NJ6 502 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 KCNK17Q96T54 332 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 TUBA1CQ9BQE3 449 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 ACPTQ9BZG2 426 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 ROPN1BQ9BZX4 212 aaPredicted RBP11.95□□□□□ -0.5
SYCN-201ENST00000318438 ROPN1Q9HAT0 212 aaPredicted RBP11.95□□□□□ -0.5
SYCN-201ENST00000318438 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.95□□□□□ -0.5
SYCN-201ENST00000318438 OXSMQ9NWU1 459 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.95□□□□□ -0.5
SYCN-201ENST00000318438 LGALS13Q9UHV8 139 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 LAMP3Q9UQV4 416 aa11.95□□□□□ -0.5
SYCN-201ENST00000318438 V9GYY5 206 aaPredicted RBP11.95□□□□□ -0.5
SYCN-201ENST00000318438 HEATR5AQ86XA9 2040 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 TLDC2A0PJX2 215 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 C1orf226A1L170 272 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 SERTM1A2A2V5 107 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 WASHC1A8K0Z3 465 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 UBFD1O14562 309 aaKnown RBP11.94□□□□□ -0.5
SYCN-201ENST00000318438 PGRMC2O15173 223 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 TMCC2O75069 709 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 ADAM11O75078 769 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 TRIM3O75382 744 aaPredicted RBP11.94□□□□□ -0.5
SYCN-201ENST00000318438 TNFSF13O75888 250 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 SMNDC1O75940 238 aaKnown RBP eCLIP11.94□□□□□ -0.5
SYCN-201ENST00000318438 PLAUP00749 431 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 HPNP05981 417 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 FREM3P0C091 2139 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 CYP4B1P13584 511 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 CPA3P15088 417 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 PIK3R1P27986 724 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 THBS2P35442 1172 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 UGT2B10P36537 528 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 CD79BP40259 229 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 HTR6P50406 440 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 NAGLUP54802 743 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 TRA2BP62995 288 aaKnown RBP11.94□□□□□ -0.5
SYCN-201ENST00000318438 ERVK-8P63133 956 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 ETFDHQ16134 617 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 SPIN4Q56A73 249 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 NHSL2Q5HYW2 709 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 LIPMQ5VYY2 423 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 ZNF704Q6ZNC4 412 aaPredicted RBP11.94□□□□□ -0.5
SYCN-201ENST00000318438 TRABD2AQ86V40 505 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 C9orf40Q8IXQ3 194 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 MREGQ8N565 214 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 SLC15A4Q8N697 577 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 C1orf52Q8N6N3 182 aaKnown RBP11.94□□□□□ -0.5
SYCN-201ENST00000318438 CCDC63Q8NA47 563 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 ZPLD1Q8TCW7 415 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 RIT1Q92963 219 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 KCNA7Q96RP8 456 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 TM9SF2Q99805 663 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 IQCGQ9H095 443 aaKnown RBP11.94□□□□□ -0.5
SYCN-201ENST00000318438 MID1IP1Q9NPA3 183 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 RYDENQ9NUL5 291 aaKnown RBP11.94□□□□□ -0.5
SYCN-201ENST00000318438 CNIH4Q9P003 139 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 MCM8Q9UJA3 840 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 CNOT11Q9UKZ1 510 aaKnown RBP11.94□□□□□ -0.5
SYCN-201ENST00000318438 ERVK-19Q9WJR5 959 aa11.94□□□□□ -0.5
SYCN-201ENST00000318438 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.93□□□□□ -0.5
SYCN-201ENST00000318438 OR6C76A6NM76 312 aa11.93□□□□□ -0.5
SYCN-201ENST00000318438 HRKO00198 91 aa11.93□□□□□ -0.5
SYCN-201ENST00000318438 CFPP27918 469 aa11.93□□□□□ -0.5
SYCN-201ENST00000318438 RPS4XP62701 263 aaKnown RBP11.93□□□□□ -0.5
SYCN-201ENST00000318438 TOMM20Q15388 145 aa11.93□□□□□ -0.5
SYCN-201ENST00000318438 ERCC6LQ2NKX8 1250 aa11.93□□□□□ -0.5
SYCN-201ENST00000318438 CFAP157Q5JU67 520 aa11.93□□□□□ -0.5
SYCN-201ENST00000318438 ANKRD34AQ69YU3 496 aa11.93□□□□□ -0.5
SYCN-201ENST00000318438 BICRALQ6AI39 1079 aa11.93□□□□□ -0.5
SYCN-201ENST00000318438 SLC48A1Q6P1K1 146 aa11.93□□□□□ -0.5
SYCN-201ENST00000318438 RNF111Q6ZNA4 994 aa11.93□□□□□ -0.5
SYCN-201ENST00000318438 GALNT12Q8IXK2 581 aa11.93□□□□□ -0.5
SYCN-201ENST00000318438 ARIH2OSQ8N7S6 290 aa11.93□□□□□ -0.5
SYCN-201ENST00000318438 ZNF611Q8N823 705 aa11.93□□□□□ -0.5
SYCN-201ENST00000318438 BANPQ8N9N5 519 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms