RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 OTULINQ96BN8 352 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 OTUB1Q96FW1 271 aaPredicted RBP17.92■□□□□ 0.46
RTN4-201ENST00000317610 PRAP1Q96NZ9 151 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 GALNT9Q9HCQ5 603 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 CNIH4Q9P003 139 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 CCL16O15467 120 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 MOSPD3O75425 235 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 HTR1FP30939 366 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 TRIM23P36406 574 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 INPP1P49441 399 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 TEAD2Q15562 447 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 FAM214AQ32MH5 1076 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 FAM109AQ8N4B1 249 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 KREMEN2Q8NCW0 462 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 OSTF1Q92882 214 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 VWCEQ96DN2 955 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 FAM46AQ96IP4 442 aaKnown RBP17.92■□□□□ 0.46
RTN4-201ENST00000317610 SEMA4GQ9NTN9 838 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 FPR3P25089 353 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 PSMB5P28074 263 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 SLC6A1P30531 599 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 PKLRP30613 574 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 NTSP30990 170 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 EVI2BP34910 448 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 CA8P35219 290 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 STAT5AP42229 794 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 BDH1Q02338 343 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 INSL4Q14641 139 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 CLEC12AQ5QGZ9 265 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 FAM46CQ5VWP2 391 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 SIGIRRQ6IA17 410 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 ZNF322Q6U7Q0 402 aaPredicted RBP17.91■□□□□ 0.46
RTN4-201ENST00000317610 PIGXQ8TBF5 258 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 HYLS1Q96M11 299 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 NECTIN4Q96NY8 510 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 PRR14Q9BWN1 585 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 AICDAQ9GZX7 198 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 IL20Q9NYY1 176 aa17.91■□□□□ 0.46
RTN4-201ENST00000317610 CD8B2A6NJW9 211 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 MAN2B1O00754 1011 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 KLF4O43474 513 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 CRYZL1O95825 349 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 PRNPP04156 253 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 CD8BP10966 210 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 GNSP15586 552 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 ELK1P19419 428 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 ST3GAL3Q11203 375 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 LASP1Q14847 261 aaKnown RBP17.9■□□□□ 0.46
RTN4-201ENST00000317610 ZNF791Q3KP31 576 aaPredicted RBP17.9■□□□□ 0.46
RTN4-201ENST00000317610 BHLHB9Q6PI77 547 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 ARRDC3Q96B67 414 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 SLC28A3Q9HAS3 691 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 TMA7Q9Y2S6 64 aaKnown RBP17.9■□□□□ 0.46
RTN4-201ENST00000317610 HSPB11Q9Y547 144 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 C2orf92A0A1B0GVN3 265 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 SMLR1H3BR10 107 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 J3QRE1 110 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 OR1F1O43749 312 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 CLEC3AO75596 197 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 HMGN2P05204 90 aaKnown RBP17.9■□□□□ 0.46
RTN4-201ENST00000317610 MTNR1BP49286 362 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 EPHA5P54756 1037 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 SNRPD2P62316 118 aaKnown RBP17.9■□□□□ 0.46
RTN4-201ENST00000317610 MLLT1Q03111 559 aaPredicted RBP17.9■□□□□ 0.46
RTN4-201ENST00000317610 PLA1AQ53H76 456 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 PRRC2BQ5JSZ5 2229 aaKnown RBP17.9■□□□□ 0.46
RTN4-201ENST00000317610 CEP78Q5JTW2 689 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 ZNF57Q68EA5 555 aaPredicted RBP17.9■□□□□ 0.46
RTN4-201ENST00000317610 BICRALQ6AI39 1079 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 SLC30A6Q6NXT4 461 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 ZNF793Q6ZN11 406 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 SLC37A3Q8NCC5 494 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 YIPF4Q9BSR8 244 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 WACQ9BTA9 647 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 FAIM2Q9BWQ8 316 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 MKRN2Q9H000 416 aaKnown RBP17.9■□□□□ 0.46
RTN4-201ENST00000317610 QRSL1Q9H0R6 528 aaKnown RBP17.9■□□□□ 0.46
RTN4-201ENST00000317610 FOLH1BQ9HBA9 442 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 EXTL2Q9UBQ6 330 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 GPR55Q9Y2T6 319 aaPredicted RBP17.9■□□□□ 0.46
RTN4-201ENST00000317610 PRKAB1Q9Y478 270 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 WNT6Q9Y6F9 365 aa17.9■□□□□ 0.46
RTN4-201ENST00000317610 LCMT2O60294 686 aaKnown RBP17.89■□□□□ 0.46
RTN4-201ENST00000317610 RPN2P04844 631 aa17.89■□□□□ 0.46
RTN4-201ENST00000317610 CISD3P0C7P0 127 aa17.89■□□□□ 0.46
RTN4-201ENST00000317610 PRKAG1P54619 331 aa17.89■□□□□ 0.46
RTN4-201ENST00000317610 ATP12AP54707 1039 aa17.89■□□□□ 0.46
RTN4-201ENST00000317610 MRPL28Q13084 256 aaKnown RBP17.89■□□□□ 0.46
RTN4-201ENST00000317610 GPR176Q14439 515 aa17.89■□□□□ 0.46
RTN4-201ENST00000317610 PGGHGQ32M88 737 aa17.89■□□□□ 0.46
RTN4-201ENST00000317610 ZNF311Q5JNZ3 666 aa17.89■□□□□ 0.46
RTN4-201ENST00000317610 WASH2PQ6VEQ5 465 aa17.89■□□□□ 0.46
RTN4-201ENST00000317610 AMZ2Q86W34 360 aa17.89■□□□□ 0.46
RTN4-201ENST00000317610 NR2C2APQ86WQ0 139 aa17.89■□□□□ 0.46
RTN4-201ENST00000317610 GHDCQ8N2G8 530 aa17.89■□□□□ 0.46
RTN4-201ENST00000317610 C9orf62Q8N4C0 152 aa17.89■□□□□ 0.46
RTN4-201ENST00000317610 OR5H6Q8NGV6 325 aa17.89■□□□□ 0.46
RTN4-201ENST00000317610 GFM1Q96RP9 751 aaKnown RBP17.89■□□□□ 0.46
RTN4-201ENST00000317610 TEX12Q9BXU0 123 aa17.89■□□□□ 0.46
RTN4-201ENST00000317610 CYSLTR2Q9NS75 346 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms