RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 COX18Q8N8Q8 333 aa19.82■□□□□ 0.76
ATG4D-201ENST00000309469 OR52R1Q8NGF1 315 aa19.82■□□□□ 0.76
ATG4D-201ENST00000309469 FAM81AQ8TBF8 368 aa19.82■□□□□ 0.76
ATG4D-201ENST00000309469 GPR151Q8TDV0 419 aa19.82■□□□□ 0.76
ATG4D-201ENST00000309469 APH1BQ8WW43 257 aa19.82■□□□□ 0.76
ATG4D-201ENST00000309469 PIK3R3Q92569 461 aa19.82■□□□□ 0.76
ATG4D-201ENST00000309469 RBM18Q96H35 190 aaKnown RBP19.82■□□□□ 0.76
ATG4D-201ENST00000309469 ALOXE3Q9BYJ1 711 aa19.82■□□□□ 0.76
ATG4D-201ENST00000309469 DUSP21Q9H596 190 aa19.82■□□□□ 0.76
ATG4D-201ENST00000309469 FANCEQ9HB96 536 aa19.82■□□□□ 0.76
ATG4D-201ENST00000309469 MAN2C1Q9NTJ4 1040 aa19.82■□□□□ 0.76
ATG4D-201ENST00000309469 ZNF443Q9Y2A4 671 aaPredicted RBP19.82■□□□□ 0.76
ATG4D-201ENST00000309469 TMEM184BQ9Y519 407 aaPredicted RBP19.82■□□□□ 0.76
ATG4D-201ENST00000309469 SNX5Q9Y5X3 404 aa19.82■□□□□ 0.76
ATG4D-201ENST00000309469 FRS3O43559 492 aa19.81■□□□□ 0.76
ATG4D-201ENST00000309469 TPST2O60704 377 aa19.81■□□□□ 0.76
ATG4D-201ENST00000309469 COQ9O75208 318 aa19.81■□□□□ 0.76
ATG4D-201ENST00000309469 STX11O75558 287 aa19.81■□□□□ 0.76
ATG4D-201ENST00000309469 S1PR1P21453 382 aa19.81■□□□□ 0.76
ATG4D-201ENST00000309469 CD1CP29017 333 aa19.81■□□□□ 0.76
ATG4D-201ENST00000309469 DUSP8Q13202 625 aa19.81■□□□□ 0.76
ATG4D-201ENST00000309469 SMN1Q16637 294 aaKnown RBP19.81■□□□□ 0.76
ATG4D-201ENST00000309469 PGBD2Q6P3X8 592 aa19.81■□□□□ 0.76
ATG4D-201ENST00000309469 OR51Q1Q8NH59 317 aa19.81■□□□□ 0.76
ATG4D-201ENST00000309469 NR4A3Q92570 626 aa19.81■□□□□ 0.76
ATG4D-201ENST00000309469 RIT1Q92963 219 aa19.81■□□□□ 0.76
ATG4D-201ENST00000309469 PRR14Q9BWN1 585 aa19.81■□□□□ 0.76
ATG4D-201ENST00000309469 PRMT8Q9NR22 394 aaPredicted RBP19.81■□□□□ 0.76
ATG4D-201ENST00000309469 TMEM9Q9P0T7 183 aa19.81■□□□□ 0.76
ATG4D-201ENST00000309469 NINQ8N4C6 2090 aa19.81■□□□□ 0.76
ATG4D-201ENST00000309469 THADAQ6YHU6 1953 aa19.81■□□□□ 0.76
ATG4D-201ENST00000309469 AGAP5A6NIR3 686 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 H3BMH7 237 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 OR2B3O76000 313 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 CHMP24386 653 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 GABRA3P34903 492 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 CRISP1P54107 249 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 BTG2P78543 158 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 LARS2Q15031 903 aaKnown RBP19.8■□□□□ 0.76
ATG4D-201ENST00000309469 PTGES3Q15185 160 aaKnown RBP19.8■□□□□ 0.76
ATG4D-201ENST00000309469 GPR68Q15743 365 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 DEPDC4Q8N2C3 294 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 ZNF619Q8N2I2 560 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 LINC00471Q8N535 108 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 RHOXF1Q8NHV9 184 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 HOXB13Q92826 284 aaPredicted RBP19.8■□□□□ 0.76
ATG4D-201ENST00000309469 ISOC1Q96CN7 298 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 SAP130Q9H0E3 1048 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 CTPS2Q9NRF8 586 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 REV1Q9UBZ9 1251 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 FTSJ1Q9UET6 329 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 CLDN16Q9Y5I7 305 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 ZNF701M0R085 212 aaPredicted RBP19.8■□□□□ 0.76
ATG4D-201ENST00000309469 AK1P00568 194 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 OSMP13725 252 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 CSF2RBP32927 897 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 IDH2P48735 452 aaKnown RBP19.8■□□□□ 0.76
ATG4D-201ENST00000309469 UGT2B15P54855 530 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 TAS2R41P59536 307 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 CSNK2BP67870 215 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 SLC35A2P78381 396 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 ZNF155Q12901 538 aaPredicted RBP19.8■□□□□ 0.76
ATG4D-201ENST00000309469 SNAP47Q5SQN1 464 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 DGCR6LQ9BY27 220 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 ENAMQ9NRM1 1142 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 CUTCQ9NTM9 273 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 SEMA5BQ9P283 1151 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 ERVK-18Q9QC07 812 aa19.8■□□□□ 0.76
ATG4D-201ENST00000309469 TMEM150CB9EJG8 249 aa19.79■□□□□ 0.76
ATG4D-201ENST00000309469 FAM20BO75063 409 aa19.79■□□□□ 0.76
ATG4D-201ENST00000309469 NKX2-2O95096 273 aa19.79■□□□□ 0.76
ATG4D-201ENST00000309469 THBS1P07996 1170 aa19.79■□□□□ 0.76
ATG4D-201ENST00000309469 CCNYL3P0C7X3 344 aa19.79■□□□□ 0.76
ATG4D-201ENST00000309469 PCSK6P29122 969 aa19.79■□□□□ 0.76
ATG4D-201ENST00000309469 KRT20P35900 424 aa19.79■□□□□ 0.76
ATG4D-201ENST00000309469 HSD17B7P56937 341 aa19.79■□□□□ 0.76
ATG4D-201ENST00000309469 POU6F2P78424 691 aaPredicted RBP19.79■□□□□ 0.76
ATG4D-201ENST00000309469 TARDBPQ13148 414 aaKnown RBP eCLIP19.79■□□□□ 0.76
ATG4D-201ENST00000309469 ZNF836Q6ZNA1 936 aa19.79■□□□□ 0.76
ATG4D-201ENST00000309469 NLGN4XQ8N0W4 816 aa19.79■□□□□ 0.76
ATG4D-201ENST00000309469 DGAT2Q96PD7 388 aa19.79■□□□□ 0.76
ATG4D-201ENST00000309469 CCDC90BQ9GZT6 254 aa19.79■□□□□ 0.76
ATG4D-201ENST00000309469 FBXO34Q9NWN3 711 aa19.79■□□□□ 0.76
ATG4D-201ENST00000309469 NLGN3Q9NZ94 848 aa19.79■□□□□ 0.76
ATG4D-201ENST00000309469 SUSD2Q9UGT4 822 aa19.79■□□□□ 0.76
ATG4D-201ENST00000309469 PILRBQ9UKJ0 227 aa19.79■□□□□ 0.76
ATG4D-201ENST00000309469 MN1Q10571 1320 aaPredicted RBP19.79■□□□□ 0.76
ATG4D-201ENST00000309469 OR2W5A6NFC9 320 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 ZAR1LA6NP61 321 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 TRMUO75648 421 aaKnown RBP19.78■□□□□ 0.76
ATG4D-201ENST00000309469 SOX30O94993 753 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 EPHA8P29322 1005 aaPredicted RBP19.78■□□□□ 0.76
ATG4D-201ENST00000309469 RGS8P57771 180 aaPredicted RBP19.78■□□□□ 0.76
ATG4D-201ENST00000309469 EEF1A1P68104 462 aaKnown RBP19.78■□□□□ 0.76
ATG4D-201ENST00000309469 WDR74Q6RFH5 385 aaPredicted RBP19.78■□□□□ 0.76
ATG4D-201ENST00000309469 C11orf74Q86VG3 221 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 P3H2Q8IVL5 708 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 D2HGDHQ8N465 521 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 MORN4Q8NDC4 146 aa19.78■□□□□ 0.76
ATG4D-201ENST00000309469 ZNF540Q8NDQ6 660 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms