RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 PTPN6P29350 595 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 CDKN2CP42773 168 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 MAN2A2P49641 1150 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 POU6F2P78424 691 aaPredicted RBP16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 SNTA1Q13424 505 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 GNA13Q14344 377 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 NNATQ16517 81 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 TRMT5Q32P41 509 aaKnown RBP16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 ZNF766Q5HY98 468 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 SLC22A10Q63ZE4 541 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 FAM91A1Q658Y4 838 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 SLC6A19Q695T7 634 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 C16orf47Q6ZP98 133 aaPredicted RBP16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 AMER2Q8N7J2 671 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 POGLUT1Q8NBL1 392 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 PSD4Q8NDX1 1056 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 FAM13CQ8NE31 585 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 BCAS4Q8TDM0 211 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 TMBIM1Q969X1 311 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 DTNBP1Q96EV8 351 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 SCMH1Q96GD3 660 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 SH3GL1Q99961 368 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 CCDC106Q9BWC9 280 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 PAIP1Q9H074 479 aaKnown RBP16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 SACM1LQ9NTJ5 587 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 GID8Q9NWU2 228 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 LIPT1Q9Y234 373 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 PCDHB14Q9Y5E9 798 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 DOCK10Q96BY6 2186 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 TLN1Q9Y490 2541 aaKnown RBP16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 ASPDHA6ND91 283 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 TMEM247A6NEH6 219 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 EVPLLA8MZ36 301 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 KLRC4-KLRK1H3BQV0 150 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 K7EM74 188 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 NME2P1O60361 137 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 REM1O75628 298 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 ACP2P11117 423 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 NME2P22392 152 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 NFYCQ13952 458 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 DUSP5Q16690 384 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 PAGE3Q5JUK9 113 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 ZNF468Q5VIY5 522 aaPredicted RBP16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 SPINK14Q6IE38 97 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 DNAJC14Q6Y2X3 702 aaPredicted RBP16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 DHDDSQ86SQ9 333 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 SNX32Q86XE0 403 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 FBXW8Q8N3Y1 598 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 BCORP1Q8N888 145 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 OR52N2Q8NGI0 321 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 PMM1Q92871 262 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 ROPN1LQ96C74 230 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 C16orf58Q96GQ5 468 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 OR7D2Q96RA2 312 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 HOXD1Q9GZZ0 328 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 SH2D2AQ9NP31 389 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 POLE3Q9NRF9 147 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 ANKRD10Q9NXR5 420 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 ARMCX1Q9P291 453 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 ABCG2Q9UNQ0 655 aa16.48■□□□□ 0.23
SSSCA1-201ENST00000309328 EIF4E1BA6NMX2 242 aaKnown RBP16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 CLIC1O00299 241 aa16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 TSPAN2O60636 221 aa16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 SNX4O95219 450 aa16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 GSNP06396 782 aa16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 NGFRP08138 427 aa16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 ATP6V1C1P21283 382 aa16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 CD97P48960 835 aa16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 CLK3P49761 638 aaKnown RBP16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 MNAT1P51948 309 aa16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 HPCAP84074 193 aa16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 C16orf62Q7Z3J2 963 aa16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 RNF130Q86XS8 419 aa16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 CHDHQ8NE62 594 aaPredicted RBP16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 FAM110BQ8TC76 370 aa16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 SPPL2AQ8TCT8 520 aa16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 RMND5BQ96G75 393 aaPredicted RBP16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 SIGLEC12Q96PQ1 595 aa16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 CGREF1Q99674 301 aa16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 CALML5Q9NZT1 146 aa16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 AP3M1Q9Y2T2 418 aa16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 CHCHD2Q9Y6H1 151 aaPredicted RBP16.47■□□□□ 0.23
SSSCA1-201ENST00000309328 CPAMD8Q8IZJ3 1885 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 TRBV5-3A0A0A0MS03 114 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 C15orf38-AP3S2A0A0A6YYH1 394 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 MRASO14807 208 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 ZNF354AO60765 605 aaPredicted RBP16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 KCNK2O95069 426 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 COX4I1P13073 169 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 HOXB9P17482 250 aaPredicted RBP16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 ENDOUP21128 410 aaKnown RBP16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 FBXW4P57775 412 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 DCST2Q5T1A1 773 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 SLC30A6Q6NXT4 461 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 DLEU7Q6UYE1 221 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 ARPINQ7Z6K5 226 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 ZNF227Q86WZ6 799 aa16.46■□□□□ 0.23
SSSCA1-201ENST00000309328 OR10G3Q8NGC4 313 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 225.4 ms