RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 DTNBP1Q96EV8 351 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 RMND5BQ96G75 393 aaPredicted RBP10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SLC35A4Q96G79 324 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 JSRP1Q96MG2 331 aaPredicted RBP10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CCDC115Q96NT0 180 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 TAAR6Q96RI8 345 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ADOQ96SZ5 270 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 YIPF4Q9BSR8 244 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 OSBPL11Q9BXB4 747 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ACTRT3Q9BYD9 372 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 NSRP1Q9H0G5 558 aaKnown RBP10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SH2D2AQ9NP31 389 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 MRGBPQ9NV56 204 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 B4GALT7Q9UBV7 327 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 BTNL2Q9UIR0 455 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 PCDHGB3Q9Y5G1 929 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 PRAMEF25A6NGN4 478 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CCDC154A6NI56 674 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 DUXAA6NLW8 204 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 NR5A2O00482 541 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 RFXANKO14593 260 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 NKX2-2O95096 273 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SNX4O95219 450 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ACP2P11117 423 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 MATN1P21941 496 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 RFC3P40938 356 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CLK3P49761 638 aaKnown RBP10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ANXA11P50995 505 aaKnown RBP10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 POU6F2P78424 691 aaPredicted RBP10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 RBPJQ06330 500 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 GAB1Q13480 694 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 IGFBP7Q16270 282 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 C6orf10Q5SRN2 563 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 DNAJC14Q6Y2X3 702 aaPredicted RBP10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 PACS2Q86VP3 889 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ZFP62Q8NB50 900 aaPredicted RBP10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ST6GALNAC3Q8NDV1 305 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 OR4N2Q8NGD1 307 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 PIK3R3Q92569 461 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 HGDQ93099 445 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 GIMAP5Q96F15 307 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 OTUB1Q96FW1 271 aaPredicted RBP10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ITCHQ96J02 903 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 STACQ99469 402 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SLC35A5Q9BS91 424 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 TTTY12Q9BZ98 90 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 IL1RL2Q9HB29 575 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 DUSP22Q9NRW4 184 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 DEPPQ9NTK1 212 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CCDC167Q9P0B6 97 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SEC14L3Q9UDX4 400 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CNOT11Q9UKZ1 510 aaKnown RBP10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ESPL1Q14674 2120 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CHD6Q8TD26 2715 aa10.1□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 GTF3C1Q12789 2109 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 A0A0G2JMM0 328 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 A0A1W2PPB8 328 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 A0A1W2PRS3 328 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 GXYLT2A0PJZ3 443 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ANKRD33BA6NCL7 494 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ANKUB1A6NFN9 424 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 FAM166BA8MTA8 275 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 KIR3DP1A8MWS1 328 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 NPIPA5E9PKD4 350 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 PYCARD-AS1I3L0S3 204 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CDC40O60508 579 aaKnown RBP eCLIP10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 TSPAN2O60636 221 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SCN2BO60939 215 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 AGR2O95994 175 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CYP4B1P13584 511 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ATP6V1C1P21283 382 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CASP3P42574 277 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 KHKP50053 298 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 PHC1P78364 1004 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SF3A3Q12874 501 aaKnown RBP eCLIP10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SNTA1Q13424 505 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 RCAN2Q14206 197 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 DUSP5Q16690 384 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 AGKQ53H12 422 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ATAD3BQ5T9A4 648 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 METTL21CQ5VZV1 264 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SLC30A6Q6NXT4 461 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 TMEM81Q6P7N7 255 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 GFRALQ6UXV0 394 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 BNC2Q6ZN30 1099 aaPredicted RBP10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ZNF621Q6ZSS3 439 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 C6orf120Q7Z4R8 191 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 GHDCQ8N2G8 530 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 FAM109AQ8N4B1 249 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SLC16A11Q8NCK7 471 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 HOXB13Q92826 284 aaPredicted RBP10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CDS1Q92903 461 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SPDL1Q96EA4 605 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 C16orf58Q96GQ5 468 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 GPR137Q96N19 417 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 OR7D2Q96RA2 312 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 NODALQ96S42 347 aa10.09□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SLX1AQ9BQ83 275 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms