RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 DPH1Q9BZG8 443 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 SAP130Q9H0E3 1048 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 MVB12BQ9H7P6 319 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 IL21Q9HBE4 155 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 MUTYHQ9UIF7 546 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 SCN3AQ9NY46 2000 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 LAMA1P25391 3075 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 TSPAN4O14817 238 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 PROM1O43490 865 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 CTSEP14091 401 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 DDCP20711 480 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 ITPKBP27987 946 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 PRLHRP49683 370 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 RPS25P62851 125 aaKnown RBP13.25□□□□□ -0.29
SDC2-201ENST00000302190 SHHQ15465 462 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 GGTA1PQ4G0N0 100 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 GLCCI1Q86VQ1 547 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 CCDC71Q8IV32 467 aaPredicted RBP13.25□□□□□ -0.29
SDC2-201ENST00000302190 METTL27Q8N6F8 245 aaPredicted RBP13.25□□□□□ -0.29
SDC2-201ENST00000302190 OR5H6Q8NGV6 325 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 CHTF18Q8WVB6 975 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 VMP1Q96GC9 406 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 RC3H2Q9HBD1 1191 aaKnown RBP13.25□□□□□ -0.29
SDC2-201ENST00000302190 USP36Q9P275 1121 aaKnown RBP13.25□□□□□ -0.29
SDC2-201ENST00000302190 EIF3KQ9UBQ5 218 aaKnown RBP13.25□□□□□ -0.29
SDC2-201ENST00000302190 OR51B4Q9Y5P0 310 aa13.25□□□□□ -0.29
SDC2-201ENST00000302190 LOC105369274A0A096LPK9 316 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 B8ZZF3 427 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 UGDHO60701 494 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 LSM11P83369 360 aaKnown RBP eCLIP13.24□□□□□ -0.29
SDC2-201ENST00000302190 ELAVL3Q14576 367 aaKnown RBP13.24□□□□□ -0.29
SDC2-201ENST00000302190 TRAM2Q15035 370 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 STK11Q15831 433 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 DGLUCYQ7Z3D6 616 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 OR4N4Q8N0Y3 316 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 SMAP2Q8WU79 429 aaPredicted RBP13.24□□□□□ -0.29
SDC2-201ENST00000302190 DTD2Q96FN9 168 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 TMEM27Q9HBJ8 222 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 PLPP1O14494 284 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 SLCO2B1O94956 709 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 SOX2P48431 317 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 LTB4RQ15722 352 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 ATAD3CQ5T2N8 411 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 TAAR2Q9P1P5 351 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 PADI2Q9Y2J8 665 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 TRBV5-4A0A0C4DH59 114 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 CSO75390 466 aaKnown RBP13.24□□□□□ -0.29
SDC2-201ENST00000302190 CEBPBP17676 345 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 AP2S1P53680 142 aaPredicted RBP13.24□□□□□ -0.29
SDC2-201ENST00000302190 C18orf63Q68DL7 685 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 OR4C11Q6IEV9 310 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 WDR20Q8TBZ3 569 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 ALG14Q96F25 216 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 C7orf34Q96L11 122 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 DDX31Q9H8H2 851 aaKnown RBP13.24□□□□□ -0.29
SDC2-201ENST00000302190 NANSQ9NR45 359 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 PLSCR3Q9NRY6 295 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 SPATA6Q9NWH7 488 aaPredicted RBP13.24□□□□□ -0.29
SDC2-201ENST00000302190 DNMT3BQ9UBC3 853 aaKnown RBP13.24□□□□□ -0.29
SDC2-201ENST00000302190 PLEKHM1Q9Y4G2 1056 aa13.24□□□□□ -0.29
SDC2-201ENST00000302190 A8MUA0 341 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 SCO2O43819 266 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 SCN2BO60939 215 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 LATS1O95835 1130 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 CDKL4Q5MAI5 379 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 BCL2L15Q5TBC7 163 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 NXNL2Q5VZ03 156 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 ACSM5Q6NUN0 579 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 CEACAM19Q7Z692 300 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 UCN3Q969E3 161 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 CD180Q99467 661 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 CPEB1Q9BZB8 566 aaKnown RBP13.23□□□□□ -0.29
SDC2-201ENST00000302190 SOHLH2Q9NX45 425 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 ZNF224Q9NZL3 707 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 CA5BQ9Y2D0 317 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 JUNDP17535 347 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 GDI1P31150 447 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 ACSL1P33121 698 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 WNT4P56705 351 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 TAS2R38P59533 333 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 BIKQ13323 160 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 PDGFRLQ15198 375 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 ZXDCQ2QGD7 858 aaPredicted RBP13.23□□□□□ -0.29
SDC2-201ENST00000302190 MPP7Q5T2T1 576 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 RANBP3LQ86VV4 465 aaPredicted RBP13.23□□□□□ -0.29
SDC2-201ENST00000302190 AMIGO1Q86WK6 493 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 MFSD4AQ8N468 514 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 SRFBP1Q8NEF9 429 aaKnown RBP13.23□□□□□ -0.29
SDC2-201ENST00000302190 MKRN2Q9H000 416 aaKnown RBP13.23□□□□□ -0.29
SDC2-201ENST00000302190 KCNN2Q9H2S1 579 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 ANKHQ9HCJ1 492 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 EDDM13A0A1B0GTR0 161 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 B4GALT2O60909 372 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 OR2B3O76000 313 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 CTSAP10619 480 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 AK4P27144 223 aaPredicted RBP13.23□□□□□ -0.29
SDC2-201ENST00000302190 STXBP1P61764 594 aaKnown RBP13.23□□□□□ -0.29
SDC2-201ENST00000302190 DSG2Q14126 1118 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 ZNF234Q14588 700 aa13.23□□□□□ -0.29
SDC2-201ENST00000302190 EIF4HQ15056 248 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms