RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 SLC38A1Q9H2H9 487 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 TESQ9UGI8 421 aaKnown RBP12.1□□□□□ -0.47
HIF3A-204ENST00000300862 CHST2Q9Y4C5 530 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 MAU2Q9Y6X3 613 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 A0A075B6Q4 140 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 ZIC2O95409 532 aaPredicted RBP12.1□□□□□ -0.47
HIF3A-204ENST00000300862 FHP07954 510 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 CSNK2A2P19784 350 aaPredicted RBP12.1□□□□□ -0.47
HIF3A-204ENST00000300862 SMSP52788 366 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 CLDN2P57739 230 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 RPS25P62851 125 aaKnown RBP12.1□□□□□ -0.47
HIF3A-204ENST00000300862 GALK2Q01415 458 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 COX10Q12887 443 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 HNRNPA0Q13151 305 aaKnown RBP12.1□□□□□ -0.47
HIF3A-204ENST00000300862 ZNF79Q15937 498 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 MRM1Q6IN84 353 aaKnown RBP12.1□□□□□ -0.47
HIF3A-204ENST00000300862 ZNF730Q6ZMV8 503 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 LHFPL3Q86UP9 236 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 TRIM69Q86WT6 500 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 OR4N5Q8IXE1 308 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 OR2L5Q8NG80 312 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 C1GALT1C1Q96EU7 318 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 ZNF764Q96H86 408 aaPredicted RBP12.1□□□□□ -0.47
HIF3A-204ENST00000300862 SPATA5L1Q9BVQ7 753 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 RSPH9Q9H1X1 276 aaPredicted RBP12.1□□□□□ -0.47
HIF3A-204ENST00000300862 IGFLR1Q9H665 355 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 BCL2L10Q9HD36 194 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 ABCB9Q9NP78 766 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 PAQR5Q9NXK6 330 aaPredicted RBP12.1□□□□□ -0.47
HIF3A-204ENST00000300862 DIMT1Q9UNQ2 313 aaKnown RBP12.1□□□□□ -0.47
HIF3A-204ENST00000300862 TRAPPC4Q9Y296 219 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 GRIP1Q9Y3R0 1128 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 V9GYH0 126 aa12.1□□□□□ -0.47
HIF3A-204ENST00000300862 CENPXA8MT69 81 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 ALX3O95076 343 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 TSPAN19P0C672 248 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 MSL3P1P0C860 447 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 F3P13726 295 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 ENDOUP21128 410 aaKnown RBP12.09□□□□□ -0.47
HIF3A-204ENST00000300862 GAS1P54826 345 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 EFNB1P98172 346 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 TGM3Q08188 693 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 GPM6BQ13491 265 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 RPE65Q16518 533 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 TBRG1Q3YBR2 411 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 Q5BKY6 102 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 SLC30A6Q6NXT4 461 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 SLC48A1Q6P1K1 146 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 RD3Q7Z3Z2 195 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 NKAIN4Q8IVV8 208 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 TTLQ8NG68 377 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 TEX47Q8TBZ9 253 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 FGF11Q92914 225 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 ELP4Q96EB1 424 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 RPP25Q9BUL9 199 aaKnown RBP12.09□□□□□ -0.47
HIF3A-204ENST00000300862 SLC13A4Q9UKG4 626 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 CES1P1Q9UKY3 287 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 CA5BQ9Y2D0 317 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 CEP290O15078 2479 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 VCANP13611 3396 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 DENND4AQ7Z401 1863 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 A0A0G2JPF8 293 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 HNRNPCL2B2RXH8 293 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 HNRNPCL3B7ZW38 293 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 BTN3A3O00478 584 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 PRICKLE3O43900 615 aaPredicted RBP12.09□□□□□ -0.47
HIF3A-204ENST00000300862 DNAJB6O75190 326 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 PEX14O75381 377 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 HNRNPCL4P0DMR1 293 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 MYL12AP19105 171 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 SSTR4P31391 388 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 SDC2P34741 201 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 SOX18P35713 384 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 IGFALSP35858 605 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 GPR4P46093 362 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 PDX1P52945 283 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 DAB2P98082 770 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 RUNX1T1Q06455 604 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.09□□□□□ -0.47
HIF3A-204ENST00000300862 LARS2Q15031 903 aaKnown RBP12.09□□□□□ -0.47
HIF3A-204ENST00000300862 TJAP1Q5JTD0 557 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 ENTPD8Q5MY95 495 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 SLC27A4Q6P1M0 643 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 CD300LDQ6UXZ3 194 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 ZNF784Q8NCA9 323 aaPredicted RBP12.09□□□□□ -0.47
HIF3A-204ENST00000300862 TMCO6Q96DC7 493 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 ARSGQ96EG1 525 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 PHOX2BQ99453 314 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 C3orf14Q9HBI5 128 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 FGF22Q9HCT0 170 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 ZSCAN32Q9NX65 697 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 DPP7Q9UHL4 492 aa12.09□□□□□ -0.47
HIF3A-204ENST00000300862 C5orf67F2Z3F1 127 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 PROM1O43490 865 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 ALPPP05187 535 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 GNSP15586 552 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 AK4P27144 223 aaPredicted RBP12.08□□□□□ -0.48
HIF3A-204ENST00000300862 MPIP34949 423 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 PSPHP78330 225 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 PRR5P85299 388 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms