RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 NINQ8N4C6 2090 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 NUP210LQ5VU65 1888 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 A8MVJ9 347 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 CDC123O75794 336 aaPredicted RBP14.49□□□□□ -0.09
LSM6-201ENST00000296581 GNAO1P09471 354 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 ENDOUP21128 410 aaKnown RBP14.49□□□□□ -0.09
LSM6-201ENST00000296581 RPS3AP61247 264 aaKnown RBP14.49□□□□□ -0.09
LSM6-201ENST00000296581 CHRNEQ04844 493 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 DUSP8Q13202 625 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 BIKQ13323 160 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 DSG2Q14126 1118 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 LAPTM4AQ15012 233 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 EXOSC7Q15024 291 aaKnown RBP14.49□□□□□ -0.09
LSM6-201ENST00000296581 RFX4Q33E94 735 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 CENPSQ8N2Z9 138 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 NACC2Q96BF6 587 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 LOXL4Q96JB6 756 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 OR1F2PQ96R84 312 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 MBOAT4Q96T53 435 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 DUSP22Q9NRW4 184 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 PDP1Q9P0J1 537 aaPredicted RBP14.49□□□□□ -0.09
LSM6-201ENST00000296581 DHCR7Q9UBM7 475 aaKnown RBP14.49□□□□□ -0.09
LSM6-201ENST00000296581 MUC3AQ02505 3323 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 IGHV5-10-1A0A0J9YXX1 117 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 HS6ST1O60243 411 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 ZIC2O95409 532 aaPredicted RBP14.49□□□□□ -0.09
LSM6-201ENST00000296581 ALOX5P09917 674 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 GALNSP34059 522 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 MPLP40238 635 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 HMGA2P52926 109 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 PDX1P52945 283 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 NUP107P57740 925 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 ACY1Q03154 408 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 ZIK1Q3SY52 487 aaPredicted RBP14.49□□□□□ -0.09
LSM6-201ENST00000296581 PRAMEF17Q5VTA0 474 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 KDM4DQ6B0I6 523 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 FAHD1Q6P587 224 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 CYP4Z1Q86W10 505 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 CHDHQ8NE62 594 aaPredicted RBP14.49□□□□□ -0.09
LSM6-201ENST00000296581 IFI44Q8TCB0 444 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 RIT1Q92963 219 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 RBM18Q96H35 190 aaKnown RBP14.49□□□□□ -0.09
LSM6-201ENST00000296581 FBXL20Q96IG2 436 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 PELOQ9BRX2 385 aaKnown RBP14.49□□□□□ -0.09
LSM6-201ENST00000296581 GTPBP2Q9BX10 602 aaKnown RBP14.49□□□□□ -0.09
LSM6-201ENST00000296581 PINK1Q9BXM7 581 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 TOR3AQ9H497 397 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 NDOR1Q9UHB4 597 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 C3orf18Q9UK00 162 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 KCND3Q9UK17 655 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 SATB2Q9UPW6 733 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 MMACHCQ9Y4U1 282 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 KMT2EQ8IZD2 1858 aa14.49□□□□□ -0.09
LSM6-201ENST00000296581 J3KTA2 159 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 TNFRSF11BO00300 401 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 JRKO75564 520 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 EPPINO95925 133 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 MAOAP21397 527 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 ALAS2P22557 587 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 YAP1P46937 504 aaKnown RBP14.48□□□□□ -0.09
LSM6-201ENST00000296581 OR1D4P47884 311 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 LIMS1P48059 325 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 DAPP51397 102 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 DUSP3P51452 185 aaPredicted RBP14.48□□□□□ -0.09
LSM6-201ENST00000296581 SPIBQ01892 262 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 SERTAD2Q14140 314 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 MLIPQ5VWP3 458 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 FRRS1Q6ZNA5 592 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 COMTD1Q86VU5 262 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 OR4D11Q8NGI4 311 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.48□□□□□ -0.09
LSM6-201ENST00000296581 DGAT2Q96PD7 388 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 SOX17Q9H6I2 414 aaPredicted RBP14.48□□□□□ -0.09
LSM6-201ENST00000296581 PNPLA3Q9NST1 481 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 ACER3Q9NUN7 267 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 A0A1B0GX78 115 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 SYT5O00445 386 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 LGI1O95970 557 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 ALPPP05187 535 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 ZNF883P0CG24 379 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 RAD23AP54725 363 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 DAB2P98082 770 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 FAAH2Q6GMR7 532 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 KRT80Q6KB66 452 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 OR52R1Q8NGF1 315 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 BORCS5Q969J3 196 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 ZNF578Q96N58 590 aaPredicted RBP14.48□□□□□ -0.09
LSM6-201ENST00000296581 SDF2Q99470 211 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 SMOC1Q9H4F8 434 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 ZNF304Q9HCX3 659 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 NECTIN3Q9NQS3 549 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 FAM118AQ9NWS6 357 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 PCDHGA5Q9Y5G8 931 aa14.48□□□□□ -0.09
LSM6-201ENST00000296581 FER1L5A0AVI2 2057 aa14.47□□□□□ -0.09
LSM6-201ENST00000296581 OR2W5A6NFC9 320 aa14.47□□□□□ -0.09
LSM6-201ENST00000296581 FCMRO60667 390 aa14.47□□□□□ -0.09
LSM6-201ENST00000296581 SOX30O94993 753 aa14.47□□□□□ -0.09
LSM6-201ENST00000296581 NKX2-2O95096 273 aa14.47□□□□□ -0.09
LSM6-201ENST00000296581 IGFBP5P24593 272 aa14.47□□□□□ -0.09
LSM6-201ENST00000296581 CDH12P55289 794 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms