RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 FAM60AQ9NP50 221 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 KCNE5Q9UJ90 142 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 NDRG2Q9UN36 371 aaKnown RBP11.01□□□□□ -0.65
RHO-201ENST00000296271 A0A0G2JPF8 293 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 HNRNPCL2B2RXH8 293 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 HNRNPCL3B7ZW38 293 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 PEX12O00623 359 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 ZSCAN9O15535 394 aaPredicted RBP11.01□□□□□ -0.65
RHO-201ENST00000296271 PRKNO60260 465 aaPredicted RBP11.01□□□□□ -0.65
RHO-201ENST00000296271 OXSR1O95747 527 aaPredicted RBP11.01□□□□□ -0.65
RHO-201ENST00000296271 HNRNPCL4P0DMR1 293 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 PCYT1AP49585 367 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 KIAA1024LP59773 190 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 SNRPGP62308 76 aaKnown RBP11.01□□□□□ -0.65
RHO-201ENST00000296271 SHC2P98077 582 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 TNFRSF17Q02223 184 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 MFSD4BQ5TF39 518 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 C1orf94Q6P1W5 598 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 ZAR1Q86SH2 424 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 GALNT12Q8IXK2 581 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 LRRC25Q8N386 305 aaPredicted RBP11.01□□□□□ -0.65
RHO-201ENST00000296271 BBS1Q8NFJ9 593 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 OR52I1Q8NGK6 324 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 DIO2Q92813 273 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 RNF31Q96EP0 1072 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 ZNF582Q96NG8 517 aaPredicted RBP11.01□□□□□ -0.65
RHO-201ENST00000296271 DACH2Q96NX9 599 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 BCL7BQ9BQE9 202 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 TAPBPLQ9BX59 468 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 BARHL1Q9BZE3 327 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 WDR12Q9GZL7 423 aaKnown RBP11.01□□□□□ -0.65
RHO-201ENST00000296271 SAP130Q9H0E3 1048 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 ENKD1Q9H0I2 346 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 DAPP1Q9UN19 280 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 MUC3AQ02505 3323 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 SH3D21A4FU49 640 aa11□□□□□ -0.65
RHO-201ENST00000296271 SGK494L7N484 410 aa11□□□□□ -0.65
RHO-201ENST00000296271 CDC42EP2O14613 210 aa11□□□□□ -0.65
RHO-201ENST00000296271 SSX4O60224 188 aa11□□□□□ -0.65
RHO-201ENST00000296271 SLC35G6P0C7Q6 338 aa11□□□□□ -0.65
RHO-201ENST00000296271 SPNP16150 400 aa11□□□□□ -0.65
RHO-201ENST00000296271 RPS19P39019 145 aaKnown RBP11□□□□□ -0.65
RHO-201ENST00000296271 RPS15AP62244 130 aaKnown RBP11□□□□□ -0.65
RHO-201ENST00000296271 FIGNL1Q6PIW4 674 aa11□□□□□ -0.65
RHO-201ENST00000296271 ZNF730Q6ZMV8 503 aa11□□□□□ -0.65
RHO-201ENST00000296271 USP43Q70EL4 1123 aa11□□□□□ -0.65
RHO-201ENST00000296271 TRIM48Q8IWZ4 208 aa11□□□□□ -0.65
RHO-201ENST00000296271 NRMQ8IXM6 262 aa11□□□□□ -0.65
RHO-201ENST00000296271 OR8J1Q8NGP2 316 aa11□□□□□ -0.65
RHO-201ENST00000296271 RNF217Q8TC41 542 aa11□□□□□ -0.65
RHO-201ENST00000296271 SFXN5Q8TD22 340 aa11□□□□□ -0.65
RHO-201ENST00000296271 RASSF5Q8WWW0 418 aa11□□□□□ -0.65
RHO-201ENST00000296271 RSC1A1Q92681 617 aa11□□□□□ -0.65
RHO-201ENST00000296271 HTRA1Q92743 480 aa11□□□□□ -0.65
RHO-201ENST00000296271 FGF11Q92914 225 aa11□□□□□ -0.65
RHO-201ENST00000296271 TM4SF19Q96DZ7 209 aa11□□□□□ -0.65
RHO-201ENST00000296271 PINK1Q9BXM7 581 aa11□□□□□ -0.65
RHO-201ENST00000296271 ACTRT3Q9BYD9 372 aa11□□□□□ -0.65
RHO-201ENST00000296271 MROQ9BYG7 248 aa11□□□□□ -0.65
RHO-201ENST00000296271 C3orf14Q9HBI5 128 aa11□□□□□ -0.65
RHO-201ENST00000296271 SACM1LQ9NTJ5 587 aa11□□□□□ -0.65
RHO-201ENST00000296271 PILRAQ9UKJ1 303 aa11□□□□□ -0.65
RHO-201ENST00000296271 CYP8B1Q9UNU6 501 aa11□□□□□ -0.65
RHO-201ENST00000296271 WDFY3Q8IZQ1 3526 aa11□□□□□ -0.65
RHO-201ENST00000296271 ZC3H12DA2A288 527 aaKnown RBP11□□□□□ -0.65
RHO-201ENST00000296271 FAM183AA6NL82 134 aa11□□□□□ -0.65
RHO-201ENST00000296271 KPNA4O00629 521 aaPredicted RBP11□□□□□ -0.65
RHO-201ENST00000296271 CLEC2LP0C7M8 214 aa11□□□□□ -0.65
RHO-201ENST00000296271 SMIM10L1P0DMW3 83 aa11□□□□□ -0.65
RHO-201ENST00000296271 TGM1P22735 817 aa11□□□□□ -0.65
RHO-201ENST00000296271 GAS1P54826 345 aa11□□□□□ -0.65
RHO-201ENST00000296271 RGS8P57771 180 aaPredicted RBP11□□□□□ -0.65
RHO-201ENST00000296271 RELAQ04206 551 aa11□□□□□ -0.65
RHO-201ENST00000296271 RGS1Q08116 209 aa11□□□□□ -0.65
RHO-201ENST00000296271 SPHARQ15513 63 aa11□□□□□ -0.65
RHO-201ENST00000296271 CEBPEQ15744 281 aa11□□□□□ -0.65
RHO-201ENST00000296271 TYW3Q6IPR3 259 aaKnown RBP11□□□□□ -0.65
RHO-201ENST00000296271 WDR88Q6ZMY6 472 aa11□□□□□ -0.65
RHO-201ENST00000296271 ZNF836Q6ZNA1 936 aa11□□□□□ -0.65
RHO-201ENST00000296271 ZNF367Q7RTV3 350 aa11□□□□□ -0.65
RHO-201ENST00000296271 OR4Q3Q8NH05 313 aa11□□□□□ -0.65
RHO-201ENST00000296271 SLC37A2Q8TED4 501 aa11□□□□□ -0.65
RHO-201ENST00000296271 TMEM80Q96HE8 168 aa11□□□□□ -0.65
RHO-201ENST00000296271 SMIM10Q96HG1 83 aa11□□□□□ -0.65
RHO-201ENST00000296271 PALMDQ9NP74 551 aa11□□□□□ -0.65
RHO-201ENST00000296271 HRASLS2Q9NWW9 162 aa11□□□□□ -0.65
RHO-201ENST00000296271 IRAK4Q9NWZ3 460 aa11□□□□□ -0.65
RHO-201ENST00000296271 CNOT2Q9NZN8 540 aaKnown RBP11□□□□□ -0.65
RHO-201ENST00000296271 NDOR1Q9UHB4 597 aa11□□□□□ -0.65
RHO-201ENST00000296271 B3GNT3Q9Y2A9 372 aa11□□□□□ -0.65
RHO-201ENST00000296271 HEBP2Q9Y5Z4 205 aa11□□□□□ -0.65
RHO-201ENST00000296271 TNRC18O15417 2968 aaPredicted RBP11□□□□□ -0.65
RHO-201ENST00000296271 SEC16AO15027 2179 aa11□□□□□ -0.65
RHO-201ENST00000296271 AGAP5A6NIR3 686 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 C2CD4DB7Z1M9 353 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 CCRL2O00421 344 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 PLD2O14939 933 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 GUCY1B2O75343 617 aa10.99□□□□□ -0.65
RHO-201ENST00000296271 CDC123O75794 336 aaPredicted RBP10.99□□□□□ -0.65
RHO-201ENST00000296271 IGHV4-34P06331 123 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms