RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 SPOCK2Q92563 424 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 NKX3-1Q99801 234 aaPredicted RBP11.83□□□□□ -0.52
SLX4-201ENST00000294008 RPF2Q9H7B2 306 aaKnown RBP11.83□□□□□ -0.52
SLX4-201ENST00000294008 GNG12Q9UBI6 72 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 GPR25O00155 361 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 PMM2O15305 246 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 OXSR1O95747 527 aaPredicted RBP11.83□□□□□ -0.52
SLX4-201ENST00000294008 APOFQ13790 326 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 CYBRD1Q53TN4 286 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 NPAS3Q8IXF0 933 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 CERS5Q8N5B7 392 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 PYURFQ96I23 114 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 MRPL22Q9NWU5 206 aaKnown RBP11.83□□□□□ -0.52
SLX4-201ENST00000294008 TRAPPC2LH3BP13 241 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 SEMA4FO95754 770 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 PYCR1P32322 319 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 BAXQ07812 192 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 ANKRD22Q5VYY1 191 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 SHEQ5VZ18 495 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 LPCAT3Q6P1A2 487 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 SGPP2Q8IWX5 399 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 LRRC25Q8N386 305 aaPredicted RBP11.83□□□□□ -0.52
SLX4-201ENST00000294008 ST8SIA2Q92186 375 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 GMLQ99445 158 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 LRRC3Q9BY71 257 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 GALPQ9UBC7 116 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 ZNF541Q9H0D2 1346 aa11.83□□□□□ -0.52
SLX4-201ENST00000294008 F8W036 122 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 H3BMQ9 156 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 IRAK2O43187 625 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 BLOC1S1P78537 153 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 CATSPEREQ5SY80 951 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 NAA40Q86UY6 237 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 PAPD5Q8NDF8 572 aaKnown RBP11.82□□□□□ -0.52
SLX4-201ENST00000294008 DCLRE1CQ96SD1 692 aaKnown RBP11.82□□□□□ -0.52
SLX4-201ENST00000294008 TMEM209Q96SK2 561 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 NMES1Q9C002 83 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 AKTIPQ9H8T0 292 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 ACSL5Q9ULC5 683 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 HBQ1P09105 142 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 CTRB1P17538 263 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 THBS3P49746 956 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 DAOAP59103 153 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 CTRB2Q6GPI1 263 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 TXNL1O43396 289 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 UGDHO60701 494 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 TPOP07202 933 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 STK19P49842 368 aaPredicted RBP11.82□□□□□ -0.52
SLX4-201ENST00000294008 RAB13P51153 203 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 EXOSC2Q13868 293 aaKnown RBP11.82□□□□□ -0.52
SLX4-201ENST00000294008 TAF9Q16594 264 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 TMPRSS11FQ6ZWK6 438 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 FAM46AQ96IP4 442 aaKnown RBP11.82□□□□□ -0.52
SLX4-201ENST00000294008 EXOSC1Q9Y3B2 195 aaKnown RBP11.82□□□□□ -0.52
SLX4-201ENST00000294008 GABRR3A8MPY1 467 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 SPDEFO95238 335 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 CHATP28329 748 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 RFTN1Q14699 578 aaPredicted RBP11.82□□□□□ -0.52
SLX4-201ENST00000294008 GPR33Q49SQ1 333 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 PAPD4Q6PIY7 484 aaKnown RBP11.82□□□□□ -0.52
SLX4-201ENST00000294008 OR52P1PQ8NH57 321 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 SLC30A2Q9BRI3 323 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 SFXN1Q9H9B4 322 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 OAZ3Q9UMX2 235 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 NKX6-3A6NJ46 265 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 INCA1Q0VD86 236 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 RAB35Q15286 201 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 NHSL2Q5HYW2 709 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 C11orf42Q8N5U0 333 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 PSMF1Q92530 271 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 KCNA7Q96RP8 456 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 CNN2Q99439 309 aaKnown RBP11.82□□□□□ -0.52
SLX4-201ENST00000294008 LRRC19Q9H756 370 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 CLEC5AQ9NY25 188 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 POLHQ9Y253 713 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 NPTNQ9Y639 398 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 DISP1Q96F81 1524 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 SOWAHBA6NEL2 793 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 G3V3Y1 287 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 ITGB2P05107 769 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 DCNP07585 359 aaKnown RBP11.82□□□□□ -0.52
SLX4-201ENST00000294008 SIM1P81133 766 aaPredicted RBP11.82□□□□□ -0.52
SLX4-201ENST00000294008 AADACL3Q5VUY0 350 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 LIPJQ5W064 366 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 TMEM130Q8N3G9 435 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 C9orf43Q8TAL5 461 aaPredicted RBP11.82□□□□□ -0.52
SLX4-201ENST00000294008 ALG3Q92685 438 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 ARRDC3Q96B67 414 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 SHARPINQ9H0F6 387 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 OSGIN2Q9Y236 505 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 INSL5Q9Y5Q6 135 aa11.82□□□□□ -0.52
SLX4-201ENST00000294008 TMEM233B4DJY2 109 aa11.81□□□□□ -0.52
SLX4-201ENST00000294008 NDUFB7P17568 137 aa11.81□□□□□ -0.52
SLX4-201ENST00000294008 CD9P21926 228 aa11.81□□□□□ -0.52
SLX4-201ENST00000294008 SLC14A1Q13336 389 aa11.81□□□□□ -0.52
SLX4-201ENST00000294008 CES4AQ5XG92 561 aa11.81□□□□□ -0.52
SLX4-201ENST00000294008 MAMDC2Q7Z304 686 aaPredicted RBP11.81□□□□□ -0.52
SLX4-201ENST00000294008 YTHDF3Q7Z739 585 aaKnown RBP11.81□□□□□ -0.52
SLX4-201ENST00000294008 PIGWQ7Z7B1 504 aa11.81□□□□□ -0.52
SLX4-201ENST00000294008 WDR31Q8NA23 367 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms