RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 MKRN2Q9H000 416 aaKnown RBP12.94□□□□□ -0.34
NPC1-201ENST00000269228 ING3Q9NXR8 418 aa12.94□□□□□ -0.34
NPC1-201ENST00000269228 ITGB1BP2Q9UKP3 347 aa12.94□□□□□ -0.34
NPC1-201ENST00000269228 HMGB3O15347 200 aaKnown RBP12.93□□□□□ -0.34
NPC1-201ENST00000269228 FMO6PO60774 539 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 GGTA1PQ4G0N0 100 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 ANKFN1Q8N957 763 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 OR51Q1Q8NH59 317 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 TNFAIP8L1Q8WVP5 186 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 TMEM181Q9P2C4 612 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 SLC7A7Q9UM01 511 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 S1PR1P21453 382 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 HBA1P69905 142 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 HOXC5Q00444 222 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 EEF1A2Q05639 463 aaKnown RBP12.93□□□□□ -0.34
NPC1-201ENST00000269228 SMCO1Q147U7 214 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 FAM109BQ6ICB4 259 aaPredicted RBP12.93□□□□□ -0.34
NPC1-201ENST00000269228 OR4C15Q8NGM1 316 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 MROQ9BYG7 248 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 FGF21Q9NSA1 209 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 FAM118AQ9NWS6 357 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 CLPXO76031 633 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 ADAP00813 363 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 CLUP10909 449 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 F8A1P23610 371 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 PITPNAQ00169 270 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 BNIP3Q12983 259 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 ARHGAP11AQ6P4F7 1023 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 UBTD2Q8WUN7 234 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 CRISPLD2Q9H0B8 497 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 KIAA1024LP59773 190 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 DLX2Q07687 328 aaPredicted RBP12.93□□□□□ -0.34
NPC1-201ENST00000269228 ASRGL1Q7L266 308 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 SERPINA11Q86U17 422 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 SLC44A3Q8N4M1 653 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 OR9Q2Q8NGE9 314 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 SLC37A2Q8TED4 501 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 MRGPRX1Q96LB2 322 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 PKMYT1Q99640 499 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 WDR83Q9BRX9 315 aaKnown RBP12.93□□□□□ -0.34
NPC1-201ENST00000269228 P2RY12Q9H244 342 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 DHCR7Q9UBM7 475 aaKnown RBP12.93□□□□□ -0.34
NPC1-201ENST00000269228 ANKRD31Q8N7Z5 1873 aa12.93□□□□□ -0.34
NPC1-201ENST00000269228 GRXCR2A6NFK2 248 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 CTXN1P60606 82 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 SLC5A12Q1EHB4 618 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 METRNLQ641Q3 311 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 TMEM207Q6UWW9 146 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 CLEC1AQ8NC01 280 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 GTF2H4Q92759 462 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 OR6C1Q96RD1 312 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 SLAMF8Q9P0V8 285 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 ERVK-18Q9QC07 812 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 CSN2P05814 226 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 MAP2K4P45985 399 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 HTRA4P83105 476 aaPredicted RBP12.92□□□□□ -0.34
NPC1-201ENST00000269228 RIN1Q13671 783 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 LILRA6Q6PI73 481 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 L3MBTL4Q8NA19 623 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 DPH1Q9BZG8 443 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 CNIH4Q9P003 139 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 PCDHA9Q9Y5H5 950 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 TRBV11-1A0A0K0K1C0 115 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 FAM172BPA6NC97 362 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 TNFRSF10CO14798 259 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 PYCR1P32322 319 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 HSD11B2P80365 405 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 TMEM196Q5HYL7 178 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 EEF1A1P5Q5VTE0 462 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 HORMAD2Q8N7B1 307 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 MAFAQ8NHW3 353 aaPredicted RBP12.92□□□□□ -0.34
NPC1-201ENST00000269228 ZNF675Q8TD23 568 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 DDIT4LQ96D03 193 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 PINK1Q9BXM7 581 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 NMNAT1Q9HAN9 279 aaPredicted RBP12.92□□□□□ -0.34
NPC1-201ENST00000269228 TEX10Q9NXF1 929 aaPredicted RBP12.92□□□□□ -0.34
NPC1-201ENST00000269228 TAPBPO15533 448 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 CBFA2T3O75081 653 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 MAPK3P27361 379 aaPredicted RBP12.92□□□□□ -0.34
NPC1-201ENST00000269228 GALK2Q01415 458 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 SPRED3Q2MJR0 410 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 LRIF1Q5T3J3 769 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 C1orf53Q5VUE5 145 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 ALDH16A1Q8IZ83 802 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 IQCF1Q8N6M8 205 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 OR2T11Q8NH01 316 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 FRS2Q8WU20 508 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 NARS2Q96I59 477 aaKnown RBP12.92□□□□□ -0.34
NPC1-201ENST00000269228 SFXN2Q96NB2 322 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 OR7D2Q96RA2 312 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 SMOXQ9NWM0 555 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 TUBA8Q9NY65 449 aaPredicted RBP12.92□□□□□ -0.34
NPC1-201ENST00000269228 TBC1D29Q9UFV1 150 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 GPR52Q9Y2T5 361 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 NSG1A0A0A6YYJ2 146 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 NPPBP16860 134 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 ZNF28P17035 718 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 TUBA4AP68366 448 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 LRFN4Q6PJG9 635 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 ASB18Q6ZVZ8 466 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms