RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 DNAJB5O75953 348 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 RASAL1O95294 804 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 AOC1P19801 751 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 GGT2P36268 569 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 MAP2K3P46734 347 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 HSPA7P48741 367 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 TPMTP51580 245 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 NRG1Q02297 640 aaPredicted RBP7.42□□□□□ -1.22
USP3-201ENST00000268049 KCNJ8Q15842 424 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 HES3Q5TGS1 186 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 TRAPPC6BQ86SZ2 158 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 WDR5BQ86VZ2 330 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 C14orf119Q9NWQ9 140 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 KCTD3Q9Y597 815 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 IFNA2P01563 188 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 EPOP01588 193 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 HADHBP55084 474 aaKnown RBP7.42□□□□□ -1.22
USP3-201ENST00000268049 CLDN2P57739 230 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 TSSK4Q6SA08 328 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 DHRS13Q6UX07 377 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 CPNE9Q8IYJ1 553 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 FBXL14Q8N1E6 418 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 LINC01599Q8WXQ3 324 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 SLC39A7Q92504 469 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 COQ8BQ96D53 544 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 SERINC2Q96SA4 455 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 KLF16Q9BXK1 252 aaPredicted RBP7.42□□□□□ -1.22
USP3-201ENST00000268049 EBF1Q9UH73 591 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 PROCRQ9UNN8 238 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 GLCEO94923 617 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 DDAH2O95865 285 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 KCNC4Q03721 635 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 KLHL22Q53GT1 634 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 KDELC1Q6UW63 502 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 NOXA1Q86UR1 476 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 PROKR1Q8TCW9 393 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 CANT1Q8WVQ1 401 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 SORCS1Q8WY21 1168 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 SNAPC3Q92966 411 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 TRIB3Q96RU7 358 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 BARD1Q99728 777 aaKnown RBP7.42□□□□□ -1.22
USP3-201ENST00000268049 ARL6Q9H0F7 186 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 CHRDQ9H2X0 955 aa7.42□□□□□ -1.22
USP3-201ENST00000268049 CNOT11Q9UKZ1 510 aaKnown RBP7.42□□□□□ -1.22
USP3-201ENST00000268049 RPL36Q9Y3U8 105 aaKnown RBP7.42□□□□□ -1.22
USP3-201ENST00000268049 PDCD5O14737 125 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 HOXC11O43248 304 aaPredicted RBP7.41□□□□□ -1.22
USP3-201ENST00000268049 CACNG3O60359 315 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 IFNA10P01566 189 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 IFNA4P05014 189 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 UROSP10746 265 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 SRCP12931 536 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 SLC10A7Q0GE19 358 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 AIMP2Q13155 320 aaKnown RBP7.41□□□□□ -1.22
USP3-201ENST00000268049 CTBP1Q13363 440 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 FASTKD3Q14CZ7 662 aaKnown RBP7.41□□□□□ -1.22
USP3-201ENST00000268049 FCRL6Q6DN72 434 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 ZNF574Q6ZN55 896 aaPredicted RBP7.41□□□□□ -1.22
USP3-201ENST00000268049 ZDHHC21Q8IVQ6 265 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 SPARTQ8N0X7 666 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 ACBD4Q8NC06 268 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 CHST4Q8NCG5 386 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 MFSD8Q8NHS3 518 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 PEX11GQ96HA9 241 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 FBXL20Q96IG2 436 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 ZNF559Q9BR84 538 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 ORAI3Q9BRQ5 295 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 DPH7Q9BTV6 452 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 IFT46Q9NQC8 304 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 FAM96BQ9Y3D0 163 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 NAALAD2Q9Y3Q0 740 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 PRSS44E7EML9 344 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 J3KR12 359 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 SOX1O00570 391 aaPredicted RBP7.41□□□□□ -1.22
USP3-201ENST00000268049 HTRA2O43464 458 aaPredicted RBP7.41□□□□□ -1.22
USP3-201ENST00000268049 LRP3O75074 770 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 MTX2O75431 263 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 TGM6O95932 706 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 GSTM3P21266 225 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 S100PP25815 95 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 CD70P32970 193 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 HTR3AP46098 478 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 PPP5CP53041 499 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 CAMK2DQ13557 499 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 TSTQ16762 297 aaKnown RBP7.41□□□□□ -1.22
USP3-201ENST00000268049 ARL13AQ5H913 290 aaPredicted RBP7.41□□□□□ -1.22
USP3-201ENST00000268049 PM20D1Q6GTS8 502 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 TSPAN33Q86UF1 283 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 SPATA6LQ8N4H0 392 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 ZNF781Q8N8C0 355 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 BANPQ8N9N5 519 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 OR5H6Q8NGV6 325 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 C15orf40Q8WUR7 153 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 PELI2Q9HAT8 420 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 C2orf92A0A1B0GVN3 265 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 A0A1W2PRB8 838 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 C1orf226A1L170 272 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 OR6C65A6NJZ3 312 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 METTL12A8MUP2 240 aa7.41□□□□□ -1.22
USP3-201ENST00000268049 LINC01565O15544 149 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms