RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 NIPSNAP1Q9BPW8 284 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 ARL6Q9H0F7 186 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 OR51J1Q9H342 316 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 TRPV4Q9HBA0 871 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 UPB1Q9UBR1 384 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 RABL2BQ9UNT1 228 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 COLEC10Q9Y6Z7 277 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 AHCTF1Q8WYP5 2266 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 DNAJC13O75165 2243 aa10.9□□□□□ -0.67
CLSTN3-201ENST00000266546 A0A1B0GVI7 797 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 DUXAA6NLW8 204 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 HIST1H2ABP04908 130 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 GPX2P18283 190 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 IL1RNP18510 177 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 PTNP21246 168 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 CLCN7P51798 805 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 CAV3P56539 151 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 GALEQ14376 348 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 NKG7Q16617 165 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 ZNF782Q6ZMW2 699 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 HIST3H2AQ7L7L0 130 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 SYT14Q8NB59 555 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 HIST1H2ACQ93077 130 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 ACSL5Q9ULC5 683 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 ASB1Q9Y576 335 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 GPR89AB7ZAQ6 455 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 MEN1O00255 615 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 GPR37L1O60883 481 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 SNAPC5O75971 98 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 RCBTB2O95199 551 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 GPR89BP0CG08 455 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 NDUFS1P28331 727 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 CCR8P51685 355 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 EFR3AQ14156 821 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 IER5LQ5T953 404 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 HSD11B1LQ7Z5J1 315 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 PDZD3Q86UT5 571 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 CLDN22Q8N7P3 220 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 ANKK1Q8NFD2 765 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 MOSPD2Q8NHP6 518 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 THAP7Q9BT49 309 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 HDAC8Q9BY41 377 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 TAC3Q9UHF0 121 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 KANTRA0A1W2PQU2 76 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 ASPDHA6ND91 283 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 RNASET2O00584 256 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 OR10H2O60403 315 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 KCNK2O95069 426 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 KLF8O95600 359 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 PDGFAP04085 211 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 GNSP15586 552 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 ARSBP15848 533 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 ZNF3P17036 446 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 PKLRP30613 574 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 MMP12P39900 470 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 MRPS21P82921 87 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 RPS26P11Q5JNZ5 115 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 FAM180BQ6P0A1 224 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 RFPL4BQ6ZWI9 263 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 GID4Q8IVV7 300 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 OR2T33Q8NG76 320 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 RBCK1Q9BYM8 510 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 POLE3Q9NRF9 147 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 PLSCR3Q9NRY6 295 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 NLGN3Q9NZ94 848 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 GLTPQ9NZD2 209 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 PRSS21Q9Y6M0 314 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 PIAS3Q9Y6X2 628 aa10.89□□□□□ -0.67
CLSTN3-201ENST00000266546 A0A1W2PPK0 400 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 URADA6NGE7 173 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 MOSPD3O75425 235 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 ITGA10O75578 1167 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 RGS9O75916 674 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 PLATP00750 562 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 ENDOUP21128 410 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 EDNRAP25101 427 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 ACVR2AP27037 513 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 PITPNBP48739 271 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 FNTBP49356 437 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 EIPR1Q53HC9 387 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 C15orf40Q8WUR7 153 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 MCHR1Q99705 422 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 C1QTNF3Q9BXJ4 246 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 EPHX3Q9H6B9 360 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 NANSQ9NR45 359 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 TXNL4BQ9NX01 149 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 PADI2Q9Y2J8 665 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 OR10H1Q9Y4A9 318 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 PCDHGB7Q9Y5F8 929 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 GOLGB1Q14789 3259 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 TANC1Q9C0D5 1861 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 AXIN1O15169 862 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 PRODHO43272 600 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 NUDT14O95848 222 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 ECDO95905 644 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 SSTR2P30874 369 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 PYCR1P32322 319 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 GCGRP47871 477 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 TMEM52BQ4KMG9 183 aa10.88□□□□□ -0.67
CLSTN3-201ENST00000266546 LRIF1Q5T3J3 769 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms