RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 TMEM44Q2T9K0 475 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 TRMT12Q53H54 448 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 FBXO42Q6P3S6 717 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 LILRA2Q8N149 483 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 POLR2J2Q9GZM3 115 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 GREB1Q4ZG55 1949 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 DAPL1A0PJW8 107 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 LILRA5A6NI73 299 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 TMX2-CTNND1H3BSU7 103 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 TRMUO75648 421 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 HOXB3P14651 431 aaPredicted RBP13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 ENDOUP21128 410 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 CDH11P55287 796 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 VLDLRP98155 873 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 C16orf72Q14CZ0 275 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 LAPTM4BQ86VI4 370 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 OR8H2Q8N162 312 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 OR2I1PQ8NGU4 316 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 FANK1Q8TC84 345 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 FAM46AQ96IP4 442 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 NPLQ9BXD5 320 aaPredicted RBP13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 SOX1O00570 391 aaPredicted RBP13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 FGF17O60258 216 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 CTSVO60911 334 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 ITGA3P26006 1051 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 SLC6A6P31641 620 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 ZNF671Q8TAW3 534 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 NECAB3Q96P71 396 aaPredicted RBP13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 ZNF559Q9BR84 538 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 IL20RAQ9UHF4 553 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 SLC22A7Q9Y694 548 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 A0A1B0GX78 115 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 H0YJX3 145 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 J3KTA2 159 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 TLX3O43711 291 aaPredicted RBP13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 JRKO75564 520 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 MED26O95402 600 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 OXSR1O95747 527 aaPredicted RBP13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 GPR143P51810 404 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 MICAQ29983 383 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 PDZK1Q5T2W1 519 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 DCAF12Q5T6F0 453 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 HSPBAP1Q96EW2 488 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 FSCN3Q9NQT6 498 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 ZNF99A8MXY4 864 aaPredicted RBP13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 LILRB5O75023 590 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 CD47Q08722 323 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 SPANXN2Q5MJ10 180 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 C6orf141Q5SZD1 244 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 TPRG1LQ5T0D9 272 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 P2RY8Q86VZ1 359 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 CLIP4Q8N3C7 705 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 OR10A5Q9H207 317 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 ZNF385DQ9H6B1 395 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 DKKL1Q9UK85 242 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 OR2A25A4D2G3 310 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 C11orf98E9PRG8 122 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 PLD2O14939 933 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 PAX7P23759 505 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 GCGRP47871 477 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 EEF1A2Q05639 463 aaKnown RBP13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 RUNX2Q13950 521 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 NADK2Q4G0N4 442 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 MEX3DQ86XN8 651 aaKnown RBP13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 ZNF440Q8IYI8 595 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 MARVELD2Q8N4S9 558 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 HS6ST2Q96MM7 605 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 ASPNQ9BXN1 380 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 SLC7A7Q9UM01 511 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 TMCC2O75069 709 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 NADKO95544 446 aaPredicted RBP13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 AGERQ15109 404 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 LCN1P1Q5VSP4 162 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 FAM86B1Q8N7N1 296 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 TRNT1Q96Q11 434 aaKnown RBP13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 LRRN3Q9H3W5 708 aa13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 PCYT1BQ9Y5K3 369 aaPredicted RBP13.54□□□□□ -0.24
PDLIM2-201ENST00000265810 TMEM221A6NGB7 291 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 M0R296 226 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 ADAP00813 363 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 ZNF823P16415 610 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 PPP1CAP62136 330 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 VWA2Q5GFL6 755 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 SLC35F3Q8IY50 421 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 PROKR2Q8NFJ6 384 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 GAB3Q8WWW8 586 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 SMOC1Q9H4F8 434 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 TNFRSF10DQ9UBN6 386 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 NCOR1O75376 2440 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 UNC119BA6NIH7 251 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 WWP2O00308 870 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 SLC5A2P31639 672 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 KCNJ10P78508 379 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 PIGFQ07326 219 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 NKAIN1Q4KMZ8 207 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 MFSD12Q6NUT3 480 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 FRRS1Q6ZNA5 592 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 TOR1AIP2Q8NFQ8 470 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 OR2T33Q8NG76 320 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms