RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 ABCA11PQ4W5N1 156 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 TCEAL6Q6IPX3 200 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 RNF165Q6ZSG1 346 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 KCTD20Q7Z5Y7 419 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 KLBQ86Z14 1044 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 ZNF417Q8TAU3 575 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 DOCK11Q5JSL3 2073 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 MAT2AP31153 395 aaKnown RBP11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 AVPI1Q5T686 147 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 PDZD3Q86UT5 571 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 GHDCQ8N2G8 530 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 OR9A1PQ8NGU1 263 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 CNTNAP3BQ96NU0 1288 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 PINK1Q9BXM7 581 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 SLAMF8Q9P0V8 285 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 TRBV2A0A0J9YWF9 115 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 HSPA12AO43301 675 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 MAOBP27338 520 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 ACVR1Q04771 509 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 HES5Q5TA89 166 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 SPNS1Q9H2V7 528 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 ABI3Q9P2A4 366 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 CLDN4O14493 209 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 F2P00734 622 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 VLDLRP98155 873 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 ZNF587Q96SQ5 575 aaPredicted RBP11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 SLC35C2Q9NQQ7 365 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 PCDHGA6Q9Y5G7 932 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 DOPEY2Q9Y3R5 2298 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 S1PR1P21453 382 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 STK19P49842 368 aaPredicted RBP11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 SMN1Q16637 294 aaKnown RBP11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 UPP1Q16831 310 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 ZNF627Q7L945 461 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 ARL14Q8N4G2 192 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 LSMEM1Q8N8F7 131 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 OR56A3Q8NH54 315 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 CMTM3Q96MX0 182 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 METTL8Q9H825 291 aaKnown RBP11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 ELL3Q9HB65 397 aaPredicted RBP11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 DUSP11O75319 330 aaKnown RBP11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 PRSS3P35030 304 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 MAPK14Q16539 360 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 ELP2Q6IA86 826 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 SSX6Q7RTT6 188 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 COMMD6Q7Z4G1 85 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 HUS1BQ8NHY5 278 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 ZNF354BQ96LW1 612 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 HDHD5Q9BXW7 423 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 OSTM1Q86WC4 334 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 ZMIZ2Q8NF64 920 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 SFXN5Q8TD22 340 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 BTF3L4Q96K17 158 aa11.08□□□□□ -0.64
DNMT3A-201ENST00000264709 UBFD1O14562 309 aaKnown RBP11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 AKAIN1P0CW23 69 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 GIMD1P0DJR0 217 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 VEGFCP49767 419 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 FAM205BPQ63HN1 556 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 SLC16A12Q6ZSM3 486 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 C6orf120Q7Z4R8 191 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 METTL17Q9H7H0 456 aaPredicted RBP11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 PDCD11Q14690 1871 aaKnown RBP11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 C2orf92A0A1B0GVN3 265 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 TLX3O43711 291 aaPredicted RBP11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 HPGDSO60760 199 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 F7P08709 466 aaPredicted RBP11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 FNTBP49356 437 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 SLC30A6Q6NXT4 461 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 SEMA4CQ9C0C4 833 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 KATNBL1Q9H079 304 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 RPS24P62847 133 aaKnown RBP11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 ABHD13Q7L211 337 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 P2RY13Q9BPV8 354 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 WDR26Q9H7D7 661 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 GMPR2Q9P2T1 348 aaKnown RBP11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 DOCK8Q8NF50 2099 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 HOXC11O43248 304 aaPredicted RBP11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 NUDT7P0C024 238 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 CCND3P30281 292 aaPredicted RBP11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 CD52P31358 61 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 ZNF169Q14929 603 aaPredicted RBP11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 PXKQ7Z7A4 578 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 CHST4Q8NCG5 386 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 OR2L2Q8NH16 312 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 GPER1Q99527 375 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 SRRQ9GZT4 340 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 NTN4Q9HB63 628 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 WDR45Q9Y484 360 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 TBC1D3BA6NDS4 549 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 SYT5O00445 386 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 FMO6PO60774 539 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 CLRN3Q8NCR9 226 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 MOCOSQ96EN8 888 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 BTBD2Q9BX70 525 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 MSRAQ9UJ68 235 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 PADI3Q9ULW8 664 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 SHANK3Q9BYB0 1731 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 BEST1O76090 585 aa11.07□□□□□ -0.64
DNMT3A-201ENST00000264709 OR12D2P58182 307 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms