RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 RBBP4Q09028 425 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 Q0VFX4 171 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 ATP1A4Q13733 1029 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 EBPQ15125 230 aaKnown RBP9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 ZNHIT3Q15649 155 aaPredicted RBP9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 ZNF630Q2M218 657 aaPredicted RBP9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 TBC1D25Q3MII6 688 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 DCST2Q5T1A1 773 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 FCRLBQ6BAA4 426 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 LCN8Q6JVE9 175 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 HEPHL1Q6MZM0 1159 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 REEP3Q6NUK4 255 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 ZCCHC12Q6PEW1 402 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 ENPP6Q6UWR7 440 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 NDUFAF7Q7L592 441 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 MRGPREQ86SM8 312 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 TNIP2Q8NFZ5 429 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 NXPE2Q96DL1 559 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 LRGUKQ96M69 825 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 SDF2Q99470 211 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 TREX2Q9BQ50 279 aaPredicted RBP9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 SPATA9Q9BWV2 254 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 SLC38A1Q9H2H9 487 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 DUSP22Q9NRW4 184 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 P4HTMQ9NXG6 502 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 GIN1Q9NXP7 522 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 PRODH2Q9UF12 536 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 KCND3Q9UK17 655 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 FBXL4Q9UKA2 621 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 PCDHGA6Q9Y5G7 932 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 APC2O95996 2303 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 NSG1A0A0A6YYJ2 146 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 CENPVL1A0A0U1RR11 272 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 DUXAA6NLW8 204 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 TMEM229AB2RXF0 380 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 WWP2O00308 870 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 ASNA1O43681 348 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 TLX3O43711 291 aaPredicted RBP9□□□□□ -0.97
SNRNP40-201ENST00000263694 MAN1A2O60476 641 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 ZNF354AO60765 605 aaPredicted RBP9□□□□□ -0.97
SNRNP40-201ENST00000263694 GMNNO75496 209 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 KRT36O76013 467 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 KCNK2O95069 426 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 ZNF682O95780 498 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 ITGAMP11215 1152 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 PPICP45877 212 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 ANXA11P50995 505 aaKnown RBP9□□□□□ -0.97
SNRNP40-201ENST00000263694 CLCN2P51788 898 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 POLE2P56282 527 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 PCBP3P57721 371 aaKnown RBP9□□□□□ -0.97
SNRNP40-201ENST00000263694 CLN3Q13286 438 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 VEZF1Q14119 521 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 GPR68Q15743 365 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 ARHGAP11BQ3KRB8 267 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 ATAD3BQ5T9A4 648 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 HLA-DQA1Q5Y7H0 255 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 HSDL2Q6YN16 418 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 FRRS1Q6ZNA5 592 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 SLC29A4Q7RTT9 530 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 PROSER1Q86XN7 944 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 BCORP1Q8N888 145 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 SMYD1Q8NB12 490 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 C7orf57Q8NEG2 295 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 SLC26A7Q8TE54 656 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 ADAMTS17Q8TE56 1095 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 CANT1Q8WVQ1 401 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 PYDC1Q8WXC3 89 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 TAMM41Q96BW9 452 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 EFHD2Q96C19 240 aaPredicted RBP9□□□□□ -0.97
SNRNP40-201ENST00000263694 VMP1Q96GC9 406 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 LCORQ96JN0 433 aaPredicted RBP9□□□□□ -0.97
SNRNP40-201ENST00000263694 NSMCE2Q96MF7 247 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 BTBD9Q96Q07 612 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 STACQ99469 402 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 BTBD2Q9BX70 525 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 GORASP2Q9H8Y8 452 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 EXD2Q9NVH0 621 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 MAGEL2Q9UJ55 1249 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 CBLCQ9ULV8 474 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 PPIEQ9UNP9 301 aaKnown RBP9□□□□□ -0.97
SNRNP40-201ENST00000263694 ANGPT4Q9Y264 503 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 OR10H1Q9Y4A9 318 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 ZFHX4Q86UP3 3567 aa9□□□□□ -0.97
SNRNP40-201ENST00000263694 SYNDIG1LA6NDD5 238 aa8.99□□□□□ -0.97
SNRNP40-201ENST00000263694 TMEM247A6NEH6 219 aa8.99□□□□□ -0.97
SNRNP40-201ENST00000263694 H0Y3Z8 333 aa8.99□□□□□ -0.97
SNRNP40-201ENST00000263694 NKX2-8O15522 239 aa8.99□□□□□ -0.97
SNRNP40-201ENST00000263694 TPST1O60507 370 aa8.99□□□□□ -0.97
SNRNP40-201ENST00000263694 PRKD3O94806 890 aa8.99□□□□□ -0.97
SNRNP40-201ENST00000263694 STAMBPO95630 424 aa8.99□□□□□ -0.97
SNRNP40-201ENST00000263694 MT-ND1P03886 318 aa8.99□□□□□ -0.97
SNRNP40-201ENST00000263694 PRKAR1AP10644 381 aa8.99□□□□□ -0.97
SNRNP40-201ENST00000263694 TNFRSF1BP20333 461 aa8.99□□□□□ -0.97
SNRNP40-201ENST00000263694 DRD5P21918 477 aa8.99□□□□□ -0.97
SNRNP40-201ENST00000263694 GLIPR1L2Q4G1C9 344 aa8.99□□□□□ -0.97
SNRNP40-201ENST00000263694 TYW3Q6IPR3 259 aaKnown RBP8.99□□□□□ -0.97
SNRNP40-201ENST00000263694 TCTN3Q6NUS6 607 aa8.99□□□□□ -0.97
SNRNP40-201ENST00000263694 VTCN1Q7Z7D3 282 aa8.99□□□□□ -0.97
SNRNP40-201ENST00000263694 COMTD1Q86VU5 262 aa8.99□□□□□ -0.97
SNRNP40-201ENST00000263694 ZNF441Q8N8Z8 693 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms