RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 DTX4Q9Y2E6 619 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 MRPS7Q9Y2R9 242 aaKnown RBP8.52□□□□□ -1.05
CKAP2-201ENST00000258607 SPIN1Q9Y657 262 aaPredicted RBP8.52□□□□□ -1.05
CKAP2-201ENST00000258607 C2orf92A0A1B0GVN3 265 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 A8MVJ9 347 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 FOXE1O00358 373 aaPredicted RBP8.52□□□□□ -1.05
CKAP2-201ENST00000258607 MAN2B1O00754 1011 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 PRKYO43930 277 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 NCR1O76036 304 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 PLGP00747 810 aaPredicted RBP8.52□□□□□ -1.05
CKAP2-201ENST00000258607 ADRA2AP08913 450 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 RPL4P36578 427 aaKnown RBP8.52□□□□□ -1.05
CKAP2-201ENST00000258607 NAA10P41227 235 aaPredicted RBP8.52□□□□□ -1.05
CKAP2-201ENST00000258607 CMPK2Q5EBM0 449 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 KDM4DQ6B0I6 523 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 USP30Q70CQ3 517 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 SYT9Q86SS6 491 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 SMRP1Q8NCR6 262 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 FAR1Q8WVX9 515 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 GGHQ92820 318 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 SPRTNQ9H040 489 aaPredicted RBP8.52□□□□□ -1.05
CKAP2-201ENST00000258607 S1PR5Q9H228 398 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 DCSTAMPQ9H295 470 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 TBC1D23Q9NUY8 699 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 TRNAU1APQ9NX07 287 aaKnown RBP8.52□□□□□ -1.05
CKAP2-201ENST00000258607 ERVK13-1Q9NX77 482 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 SNX7Q9UNH6 387 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.52□□□□□ -1.05
CKAP2-201ENST00000258607 ANKRD61A6NGH8 418 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 C4orf47A7E2U8 309 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 BLOC1S5-TXNDC5H3BN57 136 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 H7C1C5 153 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 MYL12BO14950 172 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 HRO43593 1189 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 MFN2O95140 757 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 IFI30P13284 250 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 HSD3B1P14060 373 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 HSD3B2P26439 372 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 LCN6P62502 163 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 TRIM16LQ309B1 348 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 PDZK1Q5T2W1 519 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 DDI2Q5TDH0 399 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 PTCRAQ6ISU1 281 aaPredicted RBP8.51□□□□□ -1.05
CKAP2-201ENST00000258607 PRICKLE2Q7Z3G6 844 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 ZER1Q7Z7L7 766 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 KDM8Q8N371 416 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 LRRC25Q8N386 305 aaPredicted RBP8.51□□□□□ -1.05
CKAP2-201ENST00000258607 OR52R1Q8NGF1 315 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 OR2L8Q8NGY9 312 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 SUN3Q8TAQ9 357 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 ZNF675Q8TD23 568 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 GAB3Q8WWW8 586 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 DACT3Q96B18 629 aaPredicted RBP8.51□□□□□ -1.05
CKAP2-201ENST00000258607 ELP4Q96EB1 424 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 SAMD8Q96LT4 415 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 OR2A14Q96R47 310 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 ELF4Q99607 663 aaPredicted RBP8.51□□□□□ -1.05
CKAP2-201ENST00000258607 UCK2Q9BZX2 261 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 TMEM185BQ9H7F4 350 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 KIR3DX1Q9H7L2 352 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 SEMA4GQ9NTN9 838 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 GMEB2Q9UKD1 530 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 SLC17A4Q9Y2C5 497 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 SH3D21A4FU49 640 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 CTDSP2O14595 271 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 CHST10O43529 356 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 CDC40O60508 579 aaKnown RBP eCLIP8.51□□□□□ -1.05
CKAP2-201ENST00000258607 CLEC2LP0C7M8 214 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 PPIBP23284 216 aaKnown RBP8.51□□□□□ -1.05
CKAP2-201ENST00000258607 ELAVL4P26378 380 aaKnown RBP8.51□□□□□ -1.05
CKAP2-201ENST00000258607 SOX18P35713 384 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 MLLT3P42568 568 aaPredicted RBP8.51□□□□□ -1.05
CKAP2-201ENST00000258607 XCR1P46094 333 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 CRISP1P54107 249 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 ILF2Q12905 390 aaKnown RBP8.51□□□□□ -1.05
CKAP2-201ENST00000258607 SUZ12Q15022 739 aaKnown RBP8.51□□□□□ -1.05
CKAP2-201ENST00000258607 IQCCQ4KMZ1 466 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 EOGTQ5NDL2 527 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 TMPRSS9Q7Z410 1059 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 SLC30A8Q8IWU4 369 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 ARL14Q8N4G2 192 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 ZNF321PQ8N8H1 164 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 PAPD5Q8NDF8 572 aaKnown RBP8.51□□□□□ -1.05
CKAP2-201ENST00000258607 OR10H4Q8NGA5 316 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 OR6K6Q8NGW6 343 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 TSLPQ969D9 159 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 SLC25A36Q96CQ1 311 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 LGALS12Q96DT0 336 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 MENTQ9BUN1 341 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 ENKD1Q9H0I2 346 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 ANKHQ9HCJ1 492 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 NEUROD4Q9HD90 331 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 CLN6Q9NWW5 311 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 KLHL28Q9NXS3 571 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 CNOT11Q9UKZ1 510 aaKnown RBP8.51□□□□□ -1.05
CKAP2-201ENST00000258607 TICRRQ7Z2Z1 1910 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 SPTBN4Q9H254 2564 aa8.51□□□□□ -1.05
CKAP2-201ENST00000258607 COL6A6A6NMZ7 2263 aa8.5□□□□□ -1.05
CKAP2-201ENST00000258607 TMEM229AB2RXF0 380 aa8.5□□□□□ -1.05
CKAP2-201ENST00000258607 DVL2O14641 736 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms