RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 IPPKQ9H8X2 491 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC25A13Q9UJS0 675 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 PIN4Q9Y237 131 aaKnown RBP6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 NOP16Q9Y3C1 178 aaKnown RBP6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 COL18A1P39060 1754 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 CNTNAP2Q9UHC6 1331 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 CXorf65A6NEN9 183 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 FAM155AB1AL88 458 aaPredicted RBP6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 B4DXG7 233 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 SMIM22K7EJ46 135 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 PDHXO00330 501 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 MATN4O95460 622 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 VEGFAP15692 232 aaPredicted RBP6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 MPSTP25325 297 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 UBE2G2P60604 165 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 SKP2Q13309 424 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 VGLL4Q14135 290 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 CEBPEQ15744 281 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 GXYLT1Q4G148 440 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 C9orf64Q5T6V5 341 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF385CQ66K41 422 aaPredicted RBP6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 KIAA1161Q6NSJ0 714 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 FAM183BPQ6ZVS7 135 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 TMUB2Q71RG4 321 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 DNAJC5GQ8N7S2 189 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 CNIH3Q8TBE1 160 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 CPA5Q8WXQ8 436 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 RNF157Q96PX1 679 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 NTMT1Q9BV86 223 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 NRCAMQ92823 1304 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 MEIS2O14770 477 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 HRO43593 1189 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 HLA-DPB1P04440 258 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 JUNP05412 331 aaKnown RBP6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 MMP3P08254 477 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 POU3F3P20264 500 aaPredicted RBP6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 ABCD3P28288 659 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 ARL2P36404 184 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 GUCA1AP43080 201 aaPredicted RBP6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 HTRA3P83110 453 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 TP53RKQ96S44 253 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 MEAF6Q9HAF1 191 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 UBIAD1Q9Y5Z9 338 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 C4BP0C0L5 1744 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 OR2C1O95371 312 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 PGCP20142 388 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 DLSTP36957 453 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 GPX4P36969 197 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 GLUD2P49448 558 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 KCNQ1P51787 676 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 EMX1Q04741 257 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 FOXM1Q08050 763 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 SEZ6Q53EL9 994 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 ABHD13Q7L211 337 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 GALNT10Q86SR1 603 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 MARCH9Q86YJ5 346 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 IRF2BP1Q8IU81 584 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 EIF4E3Q8N5X7 224 aaKnown RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 OR10A7Q8NGE5 316 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 FBXO27Q8NI29 283 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 SLITRK1Q96PX8 696 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 H2AFJQ9BTM1 129 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 DPY30Q9C005 99 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF552Q9H707 407 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 OR2S2Q9NQN1 319 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 OPTCQ9UBM4 332 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 NAP1L6A6NFF2 107 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 TLR4O00206 839 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 DLEU1O43261 78 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 NUDT21O43809 227 aaKnown RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 PSMD10O75832 226 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 LRG1P02750 347 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 ADARB1P78563 741 aaKnown RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 ATXN7L2Q5T6C5 722 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 GPAT2Q6NUI2 795 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 KLBQ86Z14 1044 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 NPAS4Q8IUM7 802 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 PROKR2Q8NFJ6 384 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 GGACTQ9BVM4 153 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 HRH4Q9H3N8 390 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 PARPBPQ9NWS1 579 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 FAM230AA0A1W2PPH8 454 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 HMX2A2RU54 273 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 PRAMEF27A3QJZ7 478 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 PRAMEF25A6NGN4 478 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 CYB561D2O14569 222 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 PRAMEF4O60810 478 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 CNIH1O95406 144 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF26P17031 533 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 RPL22P35268 128 aaKnown RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 RPS13P62277 151 aaKnown RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 CD47Q08722 323 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 CAMK2GQ13555 558 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 GPR50Q13585 617 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 CBFBQ13951 182 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 TARBP2Q15633 366 aaKnown RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 SMAD2Q15796 467 aaKnown RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 HAGHQ16775 308 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 ADPRMQ3LIE5 342 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 RAB41Q5JT25 222 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms