RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 CMIPQ8IY22 773 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 SPICQ8N5J4 248 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 C15orf54Q8N8G6 183 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 OR2T12Q8NG77 320 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 OR2L5Q8NG80 312 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 OR2T35Q8NGX2 323 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 SLC35F5Q8WV83 523 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 OSTF1Q92882 214 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 COL26A1Q96A83 441 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 R3HDM4Q96D70 268 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 SLC22A12Q96S37 553 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 HBEGFQ99075 208 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 NANSQ9NR45 359 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 NDUFB11Q9NX14 153 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 OR12D3Q9UGF7 316 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 CLCA2Q9UQC9 943 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 SCML2Q9UQR0 700 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 KCNIP3Q9Y2W7 256 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 USP3Q9Y6I4 520 aa11.17□□□□□ -0.62
CCNA1-201ENST00000255465 MEX3AA1L020 520 aaKnown RBP11.16□□□□□ -0.62
CCNA1-201ENST00000255465 KDM4EB2RXH2 506 aaPredicted RBP11.16□□□□□ -0.62
CCNA1-201ENST00000255465 C5orf58C9J3I9 102 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 E9PI62 339 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 NEDD8-MDP1E9PL57 170 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 PSMD3O43242 534 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 MED7O43513 233 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 NARSO43776 548 aaKnown RBP11.16□□□□□ -0.62
CCNA1-201ENST00000255465 SLC28A2O43868 658 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 SLC22A3O75751 556 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 PRAMEF12O95522 483 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 CFHP08603 1231 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 HCKP08631 526 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 PAX1P15863 534 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 GABRB1P18505 474 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 NPR2P20594 1047 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 C5AR1P21730 350 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 PRKACGP22612 351 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 UQCRC2P22695 453 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 NFYAP23511 347 aaPredicted RBP11.16□□□□□ -0.62
CCNA1-201ENST00000255465 AVPR1AP37288 418 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 PGFP49763 221 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 POLR2JP52435 117 aaKnown RBP11.16□□□□□ -0.62
CCNA1-201ENST00000255465 PKIAP61925 76 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 ZXDAP98168 799 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 BIKQ13323 160 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 PWP1Q13610 501 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 HLXQ14774 488 aaPredicted RBP11.16□□□□□ -0.62
CCNA1-201ENST00000255465 IRF4Q15306 451 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 NKG7Q16617 165 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 BCL2L15Q5TBC7 163 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 OR2T5Q6IEZ7 315 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 ENPP6Q6UWR7 440 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 ABI3BPQ7Z7G0 1075 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 NAA40Q86UY6 237 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 MEIOBQ8N635 442 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 ARL14EPQ8N8R7 260 aaPredicted RBP11.16□□□□□ -0.62
CCNA1-201ENST00000255465 ZNF548Q8NEK5 533 aaPredicted RBP11.16□□□□□ -0.62
CCNA1-201ENST00000255465 FAM46DQ8NEK8 389 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 BPIFCQ8NFQ6 507 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 OR2T29Q8NH02 315 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 DNAJB8Q8NHS0 232 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 RXFP4Q8TDU9 374 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 RSPRY1Q96DX4 576 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 UBL7Q96S82 380 aaPredicted RBP11.16□□□□□ -0.62
CCNA1-201ENST00000255465 SMG9Q9H0W8 520 aaKnown RBP11.16□□□□□ -0.62
CCNA1-201ENST00000255465 GSTO2Q9H4Y5 243 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 EPHX3Q9H6B9 360 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 IKZF3Q9UKT9 509 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 ZNF490Q9ULM2 529 aaPredicted RBP11.16□□□□□ -0.62
CCNA1-201ENST00000255465 PCDHGA6Q9Y5G7 932 aa11.16□□□□□ -0.62
CCNA1-201ENST00000255465 ZCWPW2A0A1B0GU75 182 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 TMEM218A2RU14 115 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 HEPACAM2A8MVW5 462 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 MCRIP1C9JLW8 97 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 NPIPB9F8W1W9 429 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 G3V3Q6 166 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 IGHV2-5P01817 119 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 USP17L7P0C7H9 530 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 ATXN1LP0C7T5 689 aaKnown RBP11.15□□□□□ -0.62
CCNA1-201ENST00000255465 CLUP10909 449 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 AGFG1P52594 562 aaKnown RBP11.15□□□□□ -0.62
CCNA1-201ENST00000255465 ADPRHP54922 357 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 SESN2P58004 480 aaPredicted RBP11.15□□□□□ -0.62
CCNA1-201ENST00000255465 NHLH2Q02577 135 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 ST3GAL4Q11206 333 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 GAGE1Q13065 139 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 CDH18Q13634 790 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 SGO1Q5FBB7 561 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 TECRLQ5HYJ1 363 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 PAGE3Q5JUK9 113 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 MEDAGQ5VYS4 303 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 NADSYN1Q6IA69 706 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 FRMPD2BQ6IN97 320 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 ZNF730Q6ZMV8 503 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 GALNT5Q7Z7M9 940 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 ISCA2Q86U28 154 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 GLCCI1Q86VQ1 547 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 KCNMB4Q86W47 210 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 ZFAND4Q86XD8 727 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 CCDC71Q8IV32 467 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms