RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 SKA3Q8IX90 412 aa12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 SLC30A7Q8NEW0 376 aa12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 B3GNT7Q8NFL0 401 aa12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 NPLOC4Q8TAT6 608 aa12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 CNN2Q99439 309 aaKnown RBP12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 ORAI3Q9BRQ5 295 aa12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 DNAJC15Q9Y5T4 150 aa12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 CASC3O15234 703 aaKnown RBP12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 ERI3O43414 337 aaKnown RBP12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 MMP20O60882 483 aa12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 GSRP00390 522 aa12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 AK4P27144 223 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 SORDQ00796 357 aa12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 TNFRSF17Q02223 184 aa12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 SLAMF1Q13291 335 aa12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 PCBP2Q15366 365 aaKnown RBP eCLIP12.52□□□□□ -0.415e-7■■■■□ 25.7
PCDHGA3-201ENST00000253812 DNAAF1Q8NEP3 725 aa12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 OR10Z1Q8NGY1 313 aa12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 OR5P2Q8WZ92 322 aa12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 POLDIP3Q9BY77 421 aaKnown RBP12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 OLAHQ9NV23 265 aa12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 KLK4Q9Y5K2 254 aa12.52□□□□□ -0.41
PCDHGA3-201ENST00000253812 C7orf72A4D263 438 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 NRP1O14786 923 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 MAS1P04201 325 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 TP53P04637 393 aaPredicted RBP12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 PSMB1P20618 241 aaKnown RBP12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 IVDP26440 423 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 CCKBRP32239 447 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 ASPAP45381 313 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 CLDN8P56748 225 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 FCN2Q15485 313 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 ZNF691Q5VV52 312 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 GPAT4Q86UL3 456 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 FAM129CQ86XR2 697 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 LILRB2Q8N423 598 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 KRTCAP2Q8N6L1 136 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 OR4K5Q8NGD3 323 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 OR51A7Q8NH64 312 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 FNDC9Q8TBE3 224 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 RPL3LQ92901 407 aaKnown RBP12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 BORCS8Q96FH0 119 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 PCED1BQ96HM7 432 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 RADILQ96JH8 1075 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 MRPS30Q9NP92 439 aaKnown RBP12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 FAM212BQ9NTI7 297 aaPredicted RBP12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 GABARAPO95166 117 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 BMP1P13497 986 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 CBR1P16152 277 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 RABGGTBP53611 331 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 GALNT2Q10471 571 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 MEF2DQ14814 521 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 SGPP2Q8IWX5 399 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 TMEM125Q96AQ2 219 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 RAB3CQ96E17 227 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 PITHD1Q9GZP4 211 aaPredicted RBP12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 PLEKHA3Q9HB20 300 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 PATZ1Q9HBE1 687 aaKnown RBP12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 ATP13A2Q9NQ11 1180 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 LIPT1Q9Y234 373 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 PCDHGA5Q9Y5G8 931 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 SETD1AO15047 1707 aaKnown RBP12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 TTC24A2A3L6 582 aaPredicted RBP12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 A8MUA0 341 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 PRNPP04156 253 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 ADH1AP07327 375 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 AGTR2P50052 363 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 KIAA1024LP59773 190 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 RPS13P62277 151 aaKnown RBP12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 NKPD1Q17RQ9 610 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 MICAQ29983 383 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 TSSK4Q6SA08 328 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 RBM23Q86U06 439 aaKnown RBP12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 GALNT13Q8IUC8 556 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 SLAIN1Q8ND83 568 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 ANKK1Q8NFD2 765 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 ZFAND1Q8TCF1 268 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 KCTD12Q96CX2 325 aaKnown RBP12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 TSGA13Q96PP4 275 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 PKMYT1Q99640 499 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 Q9N2J8 555 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 FZD3Q9NPG1 666 aa12.51□□□□□ -0.41
PCDHGA3-201ENST00000253812 TRAV20A0A0B4J274 112 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 A0A0U1RQK1 487 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 MT-ND4P03905 459 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 ALPIP09923 528 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 ETFAP13804 333 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 HCCSP53701 268 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 MLLT11Q13015 90 aaPredicted RBP12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 DUSP7Q16829 419 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 OVCA2Q8WZ82 227 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 NINJ1Q92982 152 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 NSUN5Q96P11 429 aaKnown RBP12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 OR51B5Q9H339 312 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 ABRACLQ9P1F3 81 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 MRPS23Q9Y3D9 190 aaKnown RBP12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 NOX1Q9Y5S8 564 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 P2RX6O15547 441 aa12.5□□□□□ -0.41
PCDHGA3-201ENST00000253812 IRAK2O43187 625 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms