RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 AK4P27144 223 aaPredicted RBP3.28□□□□□ -1.88
NEB-201ENST00000172853 ELF3P78545 371 aaPredicted RBP3.28□□□□□ -1.88
NEB-201ENST00000172853 POU4F2Q12837 409 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 GPR107Q5VW38 600 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 LGI4Q8N135 537 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 CWH43Q9H720 699 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 C11orf16Q9NQ32 467 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 ERVK13-1Q9NX77 482 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 P4HTMQ9NXG6 502 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 TRPM1Q7Z4N2 1603 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 FIGNL2A6NMB9 653 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 MATN3O15232 486 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 RAP2AP10114 183 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 ERP29P30040 261 aaKnown RBP3.28□□□□□ -1.88
NEB-201ENST00000172853 RAP2BP61225 183 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 RPS13P62277 151 aaKnown RBP3.28□□□□□ -1.88
NEB-201ENST00000172853 MXD1Q05195 221 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 CTBP1Q13363 440 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 MEP1BQ16820 701 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 CDNFQ49AH0 187 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 VSIG10LQ86VR7 867 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 OR10AD1Q8NGE0 317 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 GRPEL2Q8TAA5 225 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 TWIST2Q8WVJ9 160 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 ERGIC2Q96RQ1 377 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 BOCQ9BWV1 1114 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 UFSP2Q9NUQ7 469 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 A0A0D9SG52 128 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 SUSD5O60279 629 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 RGS9O75916 674 aaPredicted RBP3.28□□□□□ -1.88
NEB-201ENST00000172853 MOGSQ13724 837 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 PAGE3Q5JUK9 113 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 OR6T1Q8NGN1 323 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 CA5BP1Q8WTZ4 195 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 C17orf50Q8WW18 174 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 EVA1AQ9H8M9 152 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 ISYNA1Q9NPH2 558 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 SIX4Q9UIU6 781 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 FAAHO00519 579 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 SPINT2O43291 252 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 NADKO95544 446 aaPredicted RBP3.28□□□□□ -1.88
NEB-201ENST00000172853 OR8U9P0C7N5 309 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 ZNF14P17017 642 aaPredicted RBP3.28□□□□□ -1.88
NEB-201ENST00000172853 TGFBIQ15582 683 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 ODF4Q2M2E3 257 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 HACD4Q5VWC8 232 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 OR5M10Q6IEU7 315 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 PTCRAQ6ISU1 281 aaPredicted RBP3.28□□□□□ -1.88
NEB-201ENST00000172853 REXO1L1PQ8IX06 675 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 SLC7A5P1Q8MH63 180 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 CSNK2A3Q8NEV1 391 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 GHITMQ9H3K2 345 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 SAR1AQ9NR31 198 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 GFOD1Q9NXC2 390 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 CDH10Q9Y6N8 788 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 MEGF11A6BM72 1044 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 F3P13726 295 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 POU3F3P20264 500 aaPredicted RBP3.28□□□□□ -1.88
NEB-201ENST00000172853 GABRA4P48169 554 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 HSD17B12Q53GQ0 312 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 TEX44Q53QW1 395 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 TLDC1Q6P9B6 456 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 B3GNT6Q6ZMB0 384 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 USP43Q70EL4 1123 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 PYDC1Q8WXC3 89 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 TPK1Q9H3S4 243 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 DLGAP4Q9Y2H0 992 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 SULT2B1O00204 365 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 SDC3O75056 442 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 UGT1A4P22310 534 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 VIPR2P41587 438 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 NUBP1P53384 320 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 UGCGQ16739 394 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 GCNT2Q8N0V5 402 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 HAVCR2Q8TDQ0 301 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 SLCO2A1Q92959 643 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 FUZQ9BT04 418 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 PARP4Q9UKK3 1724 aaKnown RBP3.28□□□□□ -1.88
NEB-201ENST00000172853 ANKRD26Q9UPS8 1709 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 A0A1W2PQU0 124 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 SRRM3A6NNA2 597 aaPredicted RBP3.28□□□□□ -1.88
NEB-201ENST00000172853 TLR4O00206 839 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 TSPAN15O95858 294 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 HOXD8P13378 290 aaPredicted RBP3.28□□□□□ -1.88
NEB-201ENST00000172853 NDUFB7P17568 137 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 RGRP47804 291 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 TBRG1Q3YBR2 411 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 DGAT2L7PQ6IED9 249 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 OVCH1Q7RTY7 1134 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 DYNLRB2Q8TF09 96 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 ZNF317Q96PQ6 595 aaPredicted RBP3.28□□□□□ -1.88
NEB-201ENST00000172853 RXFP3Q9NSD7 469 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 ZNF346Q9UL40 294 aaKnown RBP3.28□□□□□ -1.88
NEB-201ENST00000172853 A0A0B4J203 849 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 OR8U8P0C7N1 319 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 S100A4P26447 101 aaKnown RBP3.28□□□□□ -1.88
NEB-201ENST00000172853 CRABP1P29762 137 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 PLEKHS1Q5SXH7 462 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 METTL2BQ6P1Q9 378 aaKnown RBP3.28□□□□□ -1.88
NEB-201ENST00000172853 TMIGD1Q6UXZ0 262 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms