RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Dcbld2Q91ZV3 769 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 CenpnQ9CZW2 337 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ccdc3Q9D6Y1 273 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Khdrbs2Q9WU01 349 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Zfp993A2A8V4 313 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cela3aA2A9U8 283 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Olfr1188A2AV10 312 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cyp2d37-psF6YKB5 150 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Pmp22P16646 161 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Adra2aQ01338 450 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 PrlhrQ6VMN6 370 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Smyd4Q8BTK5 799 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Sdr9c7Q8K3P0 313 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Colec12Q8K4Q8 742 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Rbm12Q8R4X3 992 aaKnown RBP9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Slc3a1Q91WV7 685 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Glyr1Q922P9 546 aaKnown RBP9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Timm22Q9CQ85 194 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Atp5f1Q9CQQ7 256 aaKnown RBP9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Glipr1Q9CWG1 255 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Zbtb8aQ9CWH1 434 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 4933421I07RikQ9D420 214 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Slamf9Q9D780 285 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 ItpaQ9D892 198 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cypt12Q9DAR6 119 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cpn2Q9DBB9 547 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ccdc107Q9DCC3 242 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Slc38a3Q9DCP2 505 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Dclk1Q9JLM8 756 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Mki67E9PVX6 3177 aaKnown RBP9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Igkv18-36A0A075B5M9 114 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cytl1A1E5L0 139 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 FcmrA1KXC4 422 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tcte1A6H639 498 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Mgl2A9XX86 381 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Adamts3E9Q287 1204 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gm8229K7N749 213 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gtpbp1O08582 668 aaKnown RBP9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Zw10O54692 779 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Il1r2P27931 410 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Hoxd10P28359 340 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Prdx1P35700 199 aaKnown RBP9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Dgcr2P98154 548 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Zfp41Q02526 198 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Dcp1bQ3U564 578 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Macrod2Q3UYG8 475 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Bpifb1Q61114 474 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Nr0b2Q62227 260 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Olfr1101Q7TR59 310 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Kxd1Q80XH1 177 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cadm2Q8BLQ9 435 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Slc15a3Q8BPX9 578 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 ReltQ8BX43 436 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gpr158Q8C419 1200 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Zfpm2Q8CCH7 1151 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Scamp1Q8K021 338 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Rnf208Q8K0W3 265 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Unc5dQ8K1S2 956 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Olfr444Q8VFS6 310 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cacng6Q8VHW3 260 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ift43Q9DA69 206 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Clec2iQ9WVF9 217 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gm20695H3BLK7 282 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Vmn1r20K7N778 303 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cnih2O35089 160 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cdk5r2O35926 369 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Prl7a1O54830 266 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 NlkO54949 527 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tnfaip1O70479 316 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Atp1b1P14094 304 aaKnown RBP9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Csn1s1P19228 313 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Wnt4P22724 351 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Adrb1P34971 466 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ankdd1bQ14DN9 521 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Trpc5osQ3UHV4 110 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Slc44a5Q5RJI2 710 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Bod1Q5SQY2 173 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Wdr26Q8C6G8 641 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Yod1Q8CB27 343 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tab1Q8CF89 502 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Rnf121Q8R1Z9 327 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tmem268Q8R239 342 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Vmn1r206Q8R277 312 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Mrgprb5Q91ZB9 322 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Rprd1bQ9CSU0 326 aaKnown RBP9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Eef1e1Q9D1M4 174 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 2200002D01RikQ9D809 114 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Slc23a2Q9EPR4 648 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Olfr938Q9EQ93 315 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Praf2Q9JIG8 178 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Clec1bQ9JL99 229 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Fkbp1bQ9Z2I2 108 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Frem3Q5H8B9 2123 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Plxna2P70207 1894 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gm8973D3YX71 104 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Slc22a1O08966 556 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ltb4rO88855 351 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 DhfrP00375 187 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cntn1P12960 1020 aa9.24□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Hsd3b2P26149 373 aa9.24□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms