RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Olfr871Q7TRF0 311 aa17.34■□□□□ 0.37
Ccdc3-201ENSMUST00000027988 Vangl1Q80Z96 526 aa17.34■□□□□ 0.37
Ccdc3-201ENSMUST00000027988 Zcchc3Q8BPK2 400 aaKnown RBP17.34■□□□□ 0.37
Ccdc3-201ENSMUST00000027988 Lysmd4Q8CC84 293 aa17.34■□□□□ 0.37
Ccdc3-201ENSMUST00000027988 Dcun1d3Q8K0V2 304 aa17.34■□□□□ 0.37
Ccdc3-201ENSMUST00000027988 Tcf25Q8R3L2 676 aaKnown RBP17.34■□□□□ 0.37
Ccdc3-201ENSMUST00000027988 Ccdc92Q8VDN4 314 aa17.34■□□□□ 0.37
Ccdc3-201ENSMUST00000027988 Frs3Q91WJ0 492 aa17.34■□□□□ 0.37
Ccdc3-201ENSMUST00000027988 Akr1c21Q91WR5 323 aa17.34■□□□□ 0.37
Ccdc3-201ENSMUST00000027988 Rab28Q99KL7 221 aa17.34■□□□□ 0.37
Ccdc3-201ENSMUST00000027988 PlgrktQ9D3P8 147 aa17.34■□□□□ 0.37
Ccdc3-201ENSMUST00000027988 ChmlQ9QZD5 621 aa17.34■□□□□ 0.37
Ccdc3-201ENSMUST00000027988 PtprhE9Q0N2 971 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Prdm14E9Q3T6 561 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Slc22a1O08966 556 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Btg4O70552 250 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Smpd2O70572 419 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Mtnd2P03893 345 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 IgfalsP70389 603 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Defb43Q30KM9 69 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Gm5113Q3UGK8 141 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Slc44a5Q5RJI2 710 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Nr2f1Q60632 422 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Spin1Q61142 262 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Slc29a2Q61672 456 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Lasp1Q61792 263 aaKnown RBP17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Tas2r104Q7M723 302 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Slitrk5Q810B7 957 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Gm10330Q8BKS1 112 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Slc22a12Q8CFZ5 553 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Rtn4rl1Q8K0S5 445 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Nmral1Q8K2T1 309 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Bloc1s5Q8R015 185 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Acad8Q9D7B6 413 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 2200002D01RikQ9D809 114 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Nusap1Q9ERH4 427 aaKnown RBP17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Thbs4Q9Z1T2 963 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Ssc4dA1L0T3 586 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Esp31A8R0W3 114 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Gm21915J3QPM7 133 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 TP20293 436 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Ubl4aP21126 157 aaKnown RBP17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 GalP47212 124 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Hnrnpa1P49312 320 aaKnown RBP17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Ube2e3P52483 207 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Meig1Q61845 88 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Galnt12Q8BGT9 576 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Fam46bQ8C152 427 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Sdr9c7Q8K3P0 313 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Tm9sf3Q9ET30 587 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Cts6Q9ET52 334 aa17.33■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Il17dA0A0B4J1G4 205 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Fam217bA2AJW5 387 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Vmn2r98E9PZ56 857 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Slc10a1O08705 362 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Cntn1P12960 1020 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 NcanP55066 1268 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 UrodP70697 367 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 VclQ64727 1066 aaKnown RBP17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Tmc6Q7TN60 810 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Pgr15lQ80T54 456 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Acsm4Q80W40 580 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Fam109aQ8BH49 266 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Olfr1052Q8VGR8 312 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Pcdhac1Q91Y10 964 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Pcyt2Q922E4 404 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Olfr459Q924H8 314 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Olfr44Q9EQB8 314 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Aif1lQ9EQX4 150 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Trappc4Q9ES56 219 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Cldn6Q9Z262 219 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Zfp534A2A7A1 661 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Mamdc4A2AJA7 1228 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 DcnP28654 354 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Nrg2P56974 756 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Acss3Q14DH7 682 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Ankdd1bQ14DN9 521 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Myl12bQ3THE2 172 aaKnown RBP17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Ccser2Q3UHI0 833 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Krt76Q3UV17 594 aaKnown RBP17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 EndouQ3V188 412 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Mptx1Q8R1M8 219 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 DutQ8VCG1 200 aaKnown RBP17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 HraslsQ9QZU4 167 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Bloc1s6Q9R0C0 172 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Wdfy3Q6VNB8 3508 aa17.32■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Irs2P81122 1321 aa17.31■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Tmem201A2A8U2 664 aa17.31■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Vmn1r12G5E8G1 307 aa17.31■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 MbpP04370 250 aa17.31■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Cdh3P10287 822 aa17.31■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Guca1aP43081 202 aa17.31■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Zc3hav1Q3UPF5 946 aaKnown RBP17.31■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Mup20Q5FW60 181 aa17.31■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Dvl3Q61062 716 aa17.31■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Rcbtb1Q6NXM2 531 aa17.31■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Olfr406Q7TRX0 323 aa17.31■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Zbtb37Q8C3U9 504 aa17.31■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Q8C5S3 137 aa17.31■□□□□ 0.36
Ccdc3-201ENSMUST00000027988 Tmem163Q8C996 288 aa17.31■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms