RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 MMP25Q9NPA2 562 aa16.2■□□□□ 0.18
PHGDH-230ENST00000641927 P2RX2Q9UBL9 471 aa16.2■□□□□ 0.18
PHGDH-230ENST00000641927 C5orf58C9J3I9 102 aa16.19■□□□□ 0.18
PHGDH-230ENST00000641927 SLC28A2O43868 658 aa16.19■□□□□ 0.18
PHGDH-230ENST00000641927 RFX3P48380 749 aa16.19■□□□□ 0.18
PHGDH-230ENST00000641927 NR0B1P51843 470 aaKnown RBP16.19■□□□□ 0.18
PHGDH-230ENST00000641927 SCARB2Q14108 478 aa16.19■□□□□ 0.18
PHGDH-230ENST00000641927 ADRM1Q16186 407 aa16.19■□□□□ 0.18
PHGDH-230ENST00000641927 GPAT3Q53EU6 434 aa16.19■□□□□ 0.18
PHGDH-230ENST00000641927 ERICH5Q6P6B1 374 aa16.19■□□□□ 0.18
PHGDH-230ENST00000641927 NET1Q7Z628 596 aaPredicted RBP16.19■□□□□ 0.18
PHGDH-230ENST00000641927 PTOV1Q86YD1 416 aa16.19■□□□□ 0.18
PHGDH-230ENST00000641927 MICU2Q8IYU8 434 aa16.19■□□□□ 0.18
PHGDH-230ENST00000641927 C11orf65Q8NCR3 313 aa16.19■□□□□ 0.18
PHGDH-230ENST00000641927 OR5L2Q8NGL0 311 aa16.19■□□□□ 0.18
PHGDH-230ENST00000641927 NFKBIDQ8NI38 313 aa16.19■□□□□ 0.18
PHGDH-230ENST00000641927 ELP5Q8TE02 316 aa16.19■□□□□ 0.18
PHGDH-230ENST00000641927 UTP4Q969X6 686 aaKnown RBP16.19■□□□□ 0.18
PHGDH-230ENST00000641927 LCORQ96JN0 433 aaPredicted RBP16.19■□□□□ 0.18
PHGDH-230ENST00000641927 BTBD9Q96Q07 612 aa16.19■□□□□ 0.18
PHGDH-230ENST00000641927 CCNL2Q96S94 520 aaPredicted RBP16.19■□□□□ 0.18
PHGDH-230ENST00000641927 PCDHAC1Q9H158 963 aa16.19■□□□□ 0.18
PHGDH-230ENST00000641927 DUSP22Q9NRW4 184 aa16.19■□□□□ 0.18
PHGDH-230ENST00000641927 GPR55Q9Y2T6 319 aaPredicted RBP16.19■□□□□ 0.18
PHGDH-230ENST00000641927 GXYLT2A0PJZ3 443 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 TTC36A6NLP5 189 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 ZNF891A8MT65 544 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-230ENST00000641927 A8MUI8 341 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 A8MVJ9 347 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 GMNNO75496 209 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 NKX2-2O95096 273 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 CT45A8P0DMV1 189 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 CT45A9P0DMV2 189 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 BMP2P12643 396 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 NQO1P15559 274 aaKnown RBP16.18■□□□□ 0.18
PHGDH-230ENST00000641927 PPICP45877 212 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 DCAF7P61962 342 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 POU6F2P78424 691 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-230ENST00000641927 CDK6Q00534 326 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 SYPL1Q16563 259 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 ZNF630Q2M218 657 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-230ENST00000641927 VMACQ2NL98 169 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 CT45A2Q5DJT8 189 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 DCAF10Q5QP82 559 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 PGM2L1Q6PCE3 622 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 NPSR1Q6W5P4 371 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 GALNT10Q86SR1 603 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 OR4N2Q8NGD1 307 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 SLC38A5Q8WUX1 472 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 FIG4Q92562 907 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 ADIPOR1Q96A54 375 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 RMND5BQ96G75 393 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-230ENST00000641927 FER1L6-AS2Q96M78 137 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 DCBLD2Q96PD2 775 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 NXF5Q9H1B4 397 aaKnown RBP16.18■□□□□ 0.18
PHGDH-230ENST00000641927 TMEM38AQ9H6F2 299 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 A4GALTQ9NPC4 353 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 SLC7A8Q9UHI5 535 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 CFAP73A6NFT4 308 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 FRG2CA6NGY1 282 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 CIB2O75838 187 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 TFPTP0C1Z6 253 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 ARAFP10398 606 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 NCK1P16333 377 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 DRD5P21918 477 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 HTR1EP28566 365 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 AQP1P29972 269 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 MAP3K8P41279 467 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 HPCAP84074 193 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 RBBP4Q09028 425 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 BNIP2Q12982 314 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 EXOSC6Q5RKV6 272 aaKnown RBP16.18■□□□□ 0.18
PHGDH-230ENST00000641927 CCNJQ5T5M9 372 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 C16orf47Q6ZP98 133 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-230ENST00000641927 KBTBD2Q8IY47 623 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 ANKFN1Q8N957 763 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 OR8K3Q8NH51 312 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 THAP4Q8WY91 577 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 HOXB13Q92826 284 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-230ENST00000641927 GATA6Q92908 595 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 TMEM19Q96HH6 336 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 BTBD2Q9BX70 525 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 GIN1Q9NXP7 522 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 SUCOQ9UBS9 1254 aaKnown RBP16.18■□□□□ 0.18
PHGDH-230ENST00000641927 DKK4Q9UBT3 224 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 LIPT1Q9Y234 373 aa16.18■□□□□ 0.18
PHGDH-230ENST00000641927 PCSK5Q92824 1860 aa16.17■□□□□ 0.18
PHGDH-230ENST00000641927 ARGFXA6NJG6 315 aa16.17■□□□□ 0.18
PHGDH-230ENST00000641927 WWP2O00308 870 aa16.17■□□□□ 0.18
PHGDH-230ENST00000641927 SOX30O94993 753 aa16.17■□□□□ 0.18
PHGDH-230ENST00000641927 STAMBPO95630 424 aa16.17■□□□□ 0.18
PHGDH-230ENST00000641927 ITGAMP11215 1152 aa16.17■□□□□ 0.18
PHGDH-230ENST00000641927 Q0VFX4 171 aa16.17■□□□□ 0.18
PHGDH-230ENST00000641927 TRIM25Q14258 630 aaKnown RBP16.17■□□□□ 0.18
PHGDH-230ENST00000641927 GNA13Q14344 377 aa16.17■□□□□ 0.18
PHGDH-230ENST00000641927 RPS26P11Q5JNZ5 115 aaPredicted RBP16.17■□□□□ 0.18
PHGDH-230ENST00000641927 DCST2Q5T1A1 773 aa16.17■□□□□ 0.18
PHGDH-230ENST00000641927 TCTN3Q6NUS6 607 aa16.17■□□□□ 0.18
PHGDH-230ENST00000641927 FIGNL1Q6PIW4 674 aa16.17■□□□□ 0.18
PHGDH-230ENST00000641927 OLIG3Q7RTU3 272 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms