RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ADAMTS20P59510 1910 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 A0A1W2PRQ8 180 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 OR6C76A6NM76 312 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 AP3D1O14617 1153 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 PCDH17O14917 1159 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 KIAA0513O60268 411 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 FMO6PO60774 539 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 UGT2B17O75795 530 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 CCNB2O95067 398 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 ADAP00813 363 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 CD63P08962 238 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 FOLR1P15328 257 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 ALAS2P22557 587 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 ACP1P24666 158 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 RYKP34925 604 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 RORAP35398 523 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 NUP107P57740 925 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 CSNK2BP67870 215 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 CCL7P80098 99 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 MGAT2Q10469 447 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 FUT5Q11128 374 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 DGCR6Q14129 220 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 ELAVL1Q15717 326 aaKnown RBP9.07□□□□□ -0.96
PHGDH-215ENST00000641371 MAPK11Q15759 364 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 DUSP7Q16829 419 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 RPS26P11Q5JNZ5 115 aaPredicted RBP9.07□□□□□ -0.96
PHGDH-215ENST00000641371 RBM48Q5RL73 367 aaKnown RBP9.07□□□□□ -0.96
PHGDH-215ENST00000641371 SNAP47Q5SQN1 464 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 DCST1Q5T197 706 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 DCST2Q5T1A1 773 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 RNF220Q5VTB9 566 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 LAIR1Q6GTX8 287 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 TTC33Q6PID6 262 aaPredicted RBP9.07□□□□□ -0.96
PHGDH-215ENST00000641371 DBX2Q6ZNG2 339 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 THAP5Q7Z6K1 395 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 GALNT10Q86SR1 603 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 OR4N5Q8IXE1 308 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 CMIPQ8IY22 773 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 PARP8Q8N3A8 854 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 SMYD1Q8NB12 490 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 SLC16A11Q8NCK7 471 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 TMEM52Q8NDY8 209 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 PLPP5Q8NEB5 264 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 GPR32P1Q8NGA4 272 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 OR10G2Q8NGC3 310 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 OR52R1Q8NGF1 315 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 OR4C15Q8NGM1 316 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 OR52P1PQ8NH57 321 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 OR14A16Q8NHC5 309 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 SLC35A4Q96G79 324 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 C16orf58Q96GQ5 468 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 CNDP2Q96KP4 475 aaKnown RBP9.07□□□□□ -0.96
PHGDH-215ENST00000641371 SLC46A1Q96NT5 459 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 NECAB3Q96P71 396 aaPredicted RBP9.07□□□□□ -0.96
PHGDH-215ENST00000641371 SDF2Q99470 211 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 ARHGDIGQ99819 225 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 GABARAPL3Q9BY60 117 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 AMBRA1Q9C0C7 1298 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 HOXD1Q9GZZ0 328 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 ING2Q9H160 280 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 TOR3AQ9H497 397 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 FAM118AQ9NWS6 357 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 PCDHGA10Q9Y5H3 936 aa9.07□□□□□ -0.96
PHGDH-215ENST00000641371 HEMK1Q9Y5R4 338 aaPredicted RBP9.07□□□□□ -0.96
PHGDH-215ENST00000641371 VCANP13611 3396 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 IGLV3-12A0A075B6K2 115 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 A0A087WXM4 84 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 IGHV5-10-1A0A0J9YXX1 117 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 LOC100130705A0A1B0GUX0 176 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 PRAMEF27A3QJZ7 478 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 AGAP5A6NIR3 686 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 FAM227AF5H4B4 570 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 NTN3O00634 580 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-215ENST00000641371 POLR1CO15160 346 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-215ENST00000641371 BRINP1O60477 761 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 MRPS14O60783 128 aaKnown RBP9.06□□□□□ -0.96
PHGDH-215ENST00000641371 SNAP29O95721 258 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 LDOC1O95751 146 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-215ENST00000641371 CBX7O95931 251 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 IFNA16P05015 189 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 UBTFL6P0CB48 400 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-215ENST00000641371 ACP2P11117 423 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 IL7RP16871 459 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 TNNI3P19429 210 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 ENDOUP21128 410 aaKnown RBP9.06□□□□□ -0.96
PHGDH-215ENST00000641371 RPS4Y1P22090 263 aaKnown RBP9.06□□□□□ -0.96
PHGDH-215ENST00000641371 CSTF2P33240 577 aaKnown RBP eCLIP9.06□□□□□ -0.96
PHGDH-215ENST00000641371 LIMS1P48059 325 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 CDH12P55289 794 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 CXCR4P61073 352 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 ID2Q02363 134 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 TEKQ02763 1124 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 OCA2Q04671 838 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 ST3GAL3Q11203 375 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 COX10Q12887 443 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 KCNAB2Q13303 367 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 ILKQ13418 452 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 DUSP5Q16690 384 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 CYP27C1Q4G0S4 372 aa9.06□□□□□ -0.96
PHGDH-215ENST00000641371 TRMT12Q53H54 448 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms