RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 TRIM48Q8IWZ4 208 aa18.91■□□□□ 0.62
SYNGAP1-227ENST00000638142 ZFAND1Q8TCF1 268 aa18.91■□□□□ 0.62
SYNGAP1-227ENST00000638142 C17orf62Q9BQA9 187 aa18.91■□□□□ 0.62
SYNGAP1-227ENST00000638142 PAK6Q9NQU5 681 aaPredicted RBP18.91■□□□□ 0.62
SYNGAP1-227ENST00000638142 CLCA2Q9UQC9 943 aa18.91■□□□□ 0.62
SYNGAP1-227ENST00000638142 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.91■□□□□ 0.62
SYNGAP1-227ENST00000638142 LCMT2O60294 686 aaKnown RBP18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 CD83Q01151 205 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 C19orf57Q0VDD7 668 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 ELAVL3Q14576 367 aaKnown RBP18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 FNDC3BQ53EP0 1204 aaKnown RBP18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 DUSP18Q8NEJ0 188 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 HLA-DPB1P04440 258 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 HMGN2P05204 90 aaKnown RBP18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 SERPIND1P05546 499 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 CFL1P23528 166 aaKnown RBP18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 CDH11P55287 796 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 PRMT2P55345 433 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 CAV3P56539 151 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 RIN1Q13671 783 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 DSG2Q14126 1118 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 TMEM35AQ53FP2 167 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 ZNF793Q6ZN11 406 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 PRICKLE2Q7Z3G6 844 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 UBE2J2Q8N2K1 259 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 ARIH2OSQ8N7S6 290 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 TTLQ8NG68 377 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 CXorf40AQ8TE69 158 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 NXPE3Q969Y0 559 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 MOAP1Q96BY2 351 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 CHFRQ96EP1 664 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 YIPF4Q9BSR8 244 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 ANKRD19PQ9H560 264 aa18.9■□□□□ 0.62
SYNGAP1-227ENST00000638142 LRIT2A6NDA9 550 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 CHST10O43529 356 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 AKAP8O43823 692 aaKnown RBP18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 PRKAR1AP10644 381 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 ACSM1Q08AH1 577 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 TATDN3Q17R31 274 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 UAP1L1Q3KQV9 507 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 FAM209AQ5JX71 171 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 SHFQ7M4L6 423 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 MEX3DQ86XN8 651 aaKnown RBP18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 OR56A1Q8NGH5 318 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 ATF6BQ99941 703 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 TEX12Q9BXU0 123 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 BEX2Q9BXY8 128 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 BTBD1Q9H0C5 482 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 TMEM39AQ9NV64 488 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 SLC13A4Q9UKG4 626 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 IRAK3Q9Y616 596 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 TCF20Q9UGU0 1960 aaKnown RBP18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 ERVH48-1M5A8F1 160 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 PPM1DO15297 605 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 HPGDSO60760 199 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 ALAS2P22557 587 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 CD79BP40259 229 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 EVX1P49640 407 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 FAPQ12884 760 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 EFR3AQ14156 821 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 SLC9A5Q14940 896 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 TCEAL5Q5H9L2 206 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 ADCK2Q7Z695 626 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 LHFPL3Q86UP9 236 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 RAB42Q8N4Z0 105 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 ZFP41Q8N8Y5 198 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 ARHGDIGQ99819 225 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 CNIH4Q9P003 139 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 POLHQ9Y253 713 aa18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 DNMT3AQ9Y6K1 912 aaPredicted RBP18.89■□□□□ 0.61
SYNGAP1-227ENST00000638142 PRRT4C9JH25 899 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 SLC35G4P0C7Q5 338 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 IFNA8P32881 189 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 SOX18P35713 384 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 NTHL1P78549 312 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 ST3GAL3Q11203 375 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 ZNF311Q5JNZ3 666 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 AADACL4Q5VUY2 407 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 MZT2AQ6P582 158 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 SYCE2Q6PIF2 218 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 RRM2BQ7LG56 351 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 LINC01555Q8NAE3 123 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 PIGXQ8TBF5 258 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 DIO2Q92813 273 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 OSTF1Q92882 214 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 AICDAQ9GZX7 198 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 NIPAL2Q9H841 368 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 OR6C70A6NIJ9 312 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 WASHC1A8K0Z3 465 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 HIDE1A8MVS5 230 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 EFCAB14O75071 495 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 ERAL1O75616 437 aaKnown RBP18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 ADH1CP00326 375 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 LALBAP00709 142 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 LINC00271P0C7V0 271 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 PSKH1P11801 424 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 OMPP47874 163 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 MAP4K2Q12851 820 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 MADCAM1Q13477 382 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 ARHGEF6Q15052 776 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms