RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 ELAVL4P26378 380 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 PTPN6P29350 595 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 IL12BP29460 328 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 PTGDSP41222 190 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 RPL38P63173 70 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 SNTA1Q13424 505 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 CT45A2Q5DJT8 189 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 ARL13AQ5H913 290 aaPredicted RBP15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 TMEM81Q6P7N7 255 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 NPSR1Q6W5P4 371 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 Q6ZSR9 355 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 ZCCHC23Q6ZST2 131 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 SLC44A2Q8IWA5 706 aaPredicted RBP15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 ULK2Q8IYT8 1036 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 LILRB4Q8NHJ6 448 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 AGR3Q8TD06 166 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 GFM2Q969S9 779 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 TMCO6Q96DC7 493 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 ADOQ96SZ5 270 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 UCK2Q9BZX2 261 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 GLIPR2Q9H4G4 154 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 DDX18Q9NVP1 670 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 MAPRE3Q9UPY8 281 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 SLC6A5Q9Y345 797 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 OR10H1Q9Y4A9 318 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 TRAF6Q9Y4K3 522 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 DNAJC15Q9Y5T4 150 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 APCP25054 2843 aa15.31■□□□□ 0.04
CACNA1A-259ENST00000638114 A0A087WV62 115 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 MYO9AB2RTY4 2548 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 SNPHO15079 494 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 ABCB7O75027 752 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 SLITRK5O94991 958 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 CREB1P16220 341 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 SDC1P18827 310 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 PSPHP78330 225 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 EFR3AQ14156 821 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 KRT71Q3SY84 523 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 GALNTL6Q49A17 601 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 EIPR1Q53HC9 387 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 SH2D4BQ5SQS7 431 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 ANKRD26P1Q6NSI1 321 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 RNF165Q6ZSG1 346 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 LARP4Q71RC2 724 aaKnown RBP eCLIP15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 CLYBLQ8N0X4 340 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 MREGQ8N565 214 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 TWIST2Q8WVJ9 160 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 NTNG2Q96CW9 530 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 SLC35A4Q96G79 324 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 AMDHD1Q96NU7 426 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 TSSK3Q96PN8 268 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 CCT7Q99832 543 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 TMEM109Q9BVC6 243 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 PARD6BQ9BYG5 372 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 KCNJ16Q9NPI9 418 aa15.3■□□□□ 0.04
CACNA1A-259ENST00000638114 ADGRG4Q8IZF6 3080 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 PLOD2O00469 737 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 PIP5K1BO14986 540 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 LSM1O15116 133 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 PDPK1O15530 556 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 AKAP10O43572 662 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 TSPAN2O60636 221 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 FGF4P08620 206 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 CRYZQ08257 329 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 HSPB3Q12988 150 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 RFTN2Q52LD8 501 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 WIPI1Q5MNZ9 446 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 MEX3BQ6ZN04 569 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 YRDCQ86U90 279 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 HOMEZQ8IX15 550 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 FAM83FQ8NEG4 500 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 OR4N2Q8NGD1 307 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 CLHC1Q8NHS4 586 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 EFHD2Q96C19 240 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 FCRL1Q96LA6 429 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 TIMP4Q99727 224 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 SPOCK3Q9BQ16 436 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 TRIM8Q9BZR9 551 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 SERHLQ9NQF3 203 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 C19orf53Q9UNZ5 99 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 TMED5Q9Y3A6 229 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 PCDHGB3Q9Y5G1 929 aa15.29■□□□□ 0.04
CACNA1A-259ENST00000638114 A0A0G2JNJ9 132 aa15.28■□□□□ 0.04
CACNA1A-259ENST00000638114 FAM47E-STBD1D6RA91 191 aa15.28■□□□□ 0.04
CACNA1A-259ENST00000638114 UPK1AO00322 258 aa15.28■□□□□ 0.04
CACNA1A-259ENST00000638114 SERPINB5P36952 375 aa15.28■□□□□ 0.04
CACNA1A-259ENST00000638114 ADH7P40394 386 aa15.28■□□□□ 0.04
CACNA1A-259ENST00000638114 ZFP36L2P47974 494 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-259ENST00000638114 PNLIPRP2P54317 469 aa15.28■□□□□ 0.04
CACNA1A-259ENST00000638114 MRPS22P82650 360 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-259ENST00000638114 PSG6Q00889 435 aa15.28■□□□□ 0.04
CACNA1A-259ENST00000638114 UGT3A2Q3SY77 523 aa15.28■□□□□ 0.04
CACNA1A-259ENST00000638114 ZNF551Q7Z340 670 aaPredicted RBP15.28■□□□□ 0.04
CACNA1A-259ENST00000638114 WDR53Q7Z5U6 358 aaPredicted RBP15.28■□□□□ 0.04
CACNA1A-259ENST00000638114 PM20D2Q8IYS1 436 aa15.28■□□□□ 0.04
CACNA1A-259ENST00000638114 OR2L13Q8N349 312 aa15.28■□□□□ 0.04
CACNA1A-259ENST00000638114 CIDECQ96AQ7 238 aaPredicted RBP15.28■□□□□ 0.04
CACNA1A-259ENST00000638114 PPCDCQ96CD2 204 aa15.28■□□□□ 0.04
CACNA1A-259ENST00000638114 ELP4Q96EB1 424 aa15.28■□□□□ 0.04
CACNA1A-259ENST00000638114 ENKD1Q9H0I2 346 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms