RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 PARP16Q8N5Y8 322 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 FAM46DQ8NEK8 389 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 GPBAR1Q8TDU6 330 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 SLC37A2Q8TED4 501 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 OTUB1Q96FW1 271 aaPredicted RBP10.84□□□□□ -0.67
CLN6-217ENST00000636964 MSANTD3Q96H12 275 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 MNTQ99583 582 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 TTYH2Q9BSA4 534 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 C1GALT1Q9NS00 363 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 TMEFF2Q9UIK5 374 aaPredicted RBP10.84□□□□□ -0.67
CLN6-217ENST00000636964 ZNF221Q9UK13 617 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 CORO2BQ9UQ03 480 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 SCN2AQ99250 2005 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 TMEM265A0A087WTH1 108 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 A0A1W2PR48 441 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 METTL15A6NJ78 407 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 CTSVO60911 334 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 AGR2O95994 175 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 IGLV3-19P01714 112 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 C9P02748 559 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 TYRP1P17643 537 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 HIST1H1TP22492 207 aaPredicted RBP10.83□□□□□ -0.68
CLN6-217ENST00000636964 ATP5A1P25705 553 aaKnown RBP10.83□□□□□ -0.68
CLN6-217ENST00000636964 ATP6V1E1P36543 226 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 GCNT6Q5T4J0 391 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 SYT6Q5T7P8 510 aaPredicted RBP10.83□□□□□ -0.68
CLN6-217ENST00000636964 CBLL1Q75N03 491 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 VN1R4Q7Z5H5 301 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 CCDC103Q8IW40 242 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 TBC1D19Q8N5T2 526 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 TEX19Q8NA77 164 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 MFSD9Q8NBP5 474 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 OR2L5Q8NG80 312 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 MCFD2Q8NI22 146 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 FLVCR1-AS1Q8TAF5 88 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 ZCCHC10Q8TBK6 192 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 RAB8BQ92930 207 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 NLNQ9BYT8 704 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 RNF167Q9H6Y7 350 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 CRLF2Q9HC73 371 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 ACTR10Q9NZ32 417 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 RPS6KA6Q9UK32 745 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 CACNG2Q9Y698 323 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 FRYLO94915 3013 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 LOC100130705A0A1B0GUX0 176 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 B4DGG1 531 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 MT-ND2P03891 347 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 TMEM11P17152 192 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 AHRP35869 848 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 DCTP40126 519 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 OR1E2P47887 323 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 TP53BP2Q13625 1128 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 SCARB2Q14108 478 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 VEZF1Q14119 521 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 IRF3Q14653 427 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 TRIM40Q6P9F5 258 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 EIF3MQ7L2H7 374 aaKnown RBP10.83□□□□□ -0.68
CLN6-217ENST00000636964 ADHFE1Q8IWW8 467 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 SHISA5Q8N114 240 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 EID3Q8N140 333 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 NEDD4LQ96PU5 975 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 BCL7BQ9BQE9 202 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 ORAI3Q9BRQ5 295 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 GSDMCQ9BYG8 508 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 KCNN2Q9H2S1 579 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 MAGIXQ9H6Y5 334 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 PRDM6Q9NQX0 595 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 HRASLS2Q9NWW9 162 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 LOC105369274A0A096LPK9 316 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 LOC102723532A0A0G2JNH3 316 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 B4GALT2O60909 372 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 MITFO75030 526 aaPredicted RBP10.83□□□□□ -0.68
CLN6-217ENST00000636964 UQCRC2P22695 453 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 GRK5P34947 590 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 LSSP48449 732 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 ARFIP1P53367 373 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 PRKAG1P54619 331 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 SLC35A2P78381 396 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 IL1RL1Q01638 556 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 TMEM35AQ53FP2 167 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 SOWAHCQ53LP3 525 aaPredicted RBP10.83□□□□□ -0.68
CLN6-217ENST00000636964 TMEFF1Q8IYR6 380 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 UBQLNLQ8IYU4 475 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 OR4N4Q8N0Y3 316 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 SPPL2AQ8TCT8 520 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 KCNC2Q96PR1 638 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 CITED4Q96RK1 184 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 SEC22CQ9BRL7 303 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 WNT5BQ9H1J7 359 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 IL1RAPQ9NPH3 570 aa10.83□□□□□ -0.68
CLN6-217ENST00000636964 TRAV20A0A0B4J274 112 aa10.82□□□□□ -0.68
CLN6-217ENST00000636964 CHURC1-FNTBB4DL54 471 aa10.82□□□□□ -0.68
CLN6-217ENST00000636964 C10orf142B7Z368 130 aa10.82□□□□□ -0.68
CLN6-217ENST00000636964 SUV39H1O43463 412 aa10.82□□□□□ -0.68
CLN6-217ENST00000636964 HS6ST1O60243 411 aa10.82□□□□□ -0.68
CLN6-217ENST00000636964 DNAJB6O75190 326 aa10.82□□□□□ -0.68
CLN6-217ENST00000636964 NME6O75414 186 aaPredicted RBP10.82□□□□□ -0.68
CLN6-217ENST00000636964 FABP3P05413 133 aa10.82□□□□□ -0.68
CLN6-217ENST00000636964 LCKP06239 509 aa10.82□□□□□ -0.68
CLN6-217ENST00000636964 ZNF888P0CJ79 500 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms