RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 SLC38A10Q9HBR0 1119 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 UBE2TQ9NPD8 197 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 SLC35D1Q9NTN3 355 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 CNOT2Q9NZN8 540 aaKnown RBP4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 ENTPD4Q9Y227 616 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 TCF19Q9Y242 345 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 WDR37Q9Y2I8 494 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 SPEGQ15772 3267 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 SPTBN2O15020 2390 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 ZZEF1O43149 2961 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 LCTP09848 1927 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 EME2A4GXA9 379 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 F8WDY8 70 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 MPHOSPH10O00566 681 aaKnown RBP4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 GRID2O43424 1007 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 KHDRBS3O75525 346 aaKnown RBP4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 SCGB2A1O75556 95 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 IDH1O75874 414 aaKnown RBP4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 PTBP3O95758 552 aaKnown RBP4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 UBTFL1P0CB47 393 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 C4BPBP20851 252 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 AKT2P31751 481 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 TSFMP43897 325 aaKnown RBP4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 ACADSBP45954 432 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 HSD17B7P56937 341 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 DYNLL1P63167 89 aaKnown RBP4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 MYBPC1Q00872 1141 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 MSLNQ13421 630 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 CEBPEQ15744 281 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 RFTN2Q52LD8 501 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 ARHGAP17Q68EM7 881 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 CAPN13Q6MZZ7 669 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 TMEM184AQ6ZMB5 413 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 TMCO2Q7Z6W1 182 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 YRDCQ86U90 279 aaKnown RBP4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 VPS36Q86VN1 386 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 HOGA1Q86XE5 327 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 SLC22A15Q8IZD6 547 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 SMPDL3AQ92484 453 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 VPS39Q96JC1 886 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 MAGED4Q96JG8 741 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 CXorf58Q96LI9 332 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 RIOK1Q9BRS2 568 aaKnown RBP4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 FICDQ9BVA6 458 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 RIBC2Q9H4K1 309 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 SLC52A3Q9NQ40 469 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 MED17Q9NVC6 651 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 C2orf42Q9NWW7 574 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 BCAP29Q9UHQ4 241 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 KCNG2Q9UJ96 466 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 OR1A2Q9Y585 309 aa4.37□□□□□ -1.71
TRAPPC9-216ENST00000634178 A0A087WW49 117 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 A0A0U1RRA0 63 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 PMS2P5A8MQ11 134 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 LMX1BO60663 402 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 MTRF1O75570 445 aaKnown RBP4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 LYNP07948 512 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 PRSS56P0CW18 603 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 GP9P14770 177 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 AOC1P19801 751 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 ADSSP30520 456 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 MDH1P40925 334 aaKnown RBP4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 PRPHP41219 470 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 SOX3P41225 446 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 MAGEA4P43358 317 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 SLC6A8P48029 635 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 CCL11P51671 97 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 PAX9P55771 341 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 DLX5P56178 289 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 ABCE1P61221 599 aaKnown RBP4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 CNTN2Q02246 1040 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 ANGPT1Q15389 498 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 SGSM1Q2NKQ1 1148 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 SPANXN4Q5MJ08 99 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 STPG1Q5TH74 334 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 FIP1L1Q6UN15 594 aaKnown RBP4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 TMEM26Q6ZUK4 368 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 Q6ZVQ6 151 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 LACC1Q8IV20 430 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 MYOCDQ8IZQ8 938 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 ZNF843Q8N446 348 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 ATP8B4Q8TF62 1192 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 PINX1Q96BK5 328 aaKnown RBP4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 ZNF524Q96C55 264 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 ERGIC2Q96RQ1 377 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 HOXD1Q9GZZ0 328 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 WWP1Q9H0M0 922 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 VAT1LQ9HCJ6 419 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 NYAP2Q9P242 653 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 LNPEPQ9UIQ6 1025 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 PLCL2Q9UPR0 1127 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 MGAT4BQ9UQ53 548 aa4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 ASH1LQ9NR48 2969 aaKnown RBP4.36□□□□□ -1.71
TRAPPC9-216ENST00000634178 SETXQ7Z333 2677 aaKnown RBP4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 WDR81Q562E7 1941 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 MYH4Q9Y623 1939 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 A0A087WZY1 265 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 LMO7DNF2Z398 122 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 LINC01565O15544 149 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 KIAA0513O60268 411 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms