RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 INHBAP08476 426 aa17.2■□□□□ 0.34
SMN2-215ENST00000628696 LHX2P50458 406 aa17.2■□□□□ 0.34
SMN2-215ENST00000628696 GFRA1P56159 465 aa17.2■□□□□ 0.34
SMN2-215ENST00000628696 LETMD1Q6P1Q0 360 aa17.2■□□□□ 0.34
SMN2-215ENST00000628696 CLEC9AQ6UXN8 241 aa17.2■□□□□ 0.34
SMN2-215ENST00000628696 SMPDL3BQ92485 455 aa17.2■□□□□ 0.34
SMN2-215ENST00000628696 KAT2AQ92830 837 aa17.2■□□□□ 0.34
SMN2-215ENST00000628696 ZNF681Q96N22 645 aa17.2■□□□□ 0.34
SMN2-215ENST00000628696 UCN2Q96RP3 112 aa17.2■□□□□ 0.34
SMN2-215ENST00000628696 ZNF395Q9H8N7 513 aaPredicted RBP17.2■□□□□ 0.34
SMN2-215ENST00000628696 BRF2Q9HAW0 419 aa17.2■□□□□ 0.34
SMN2-215ENST00000628696 NINJ2Q9NZG7 142 aa17.2■□□□□ 0.34
SMN2-215ENST00000628696 CLCF1Q9UBD9 225 aa17.2■□□□□ 0.34
SMN2-215ENST00000628696 HEY2Q9UBP5 337 aa17.2■□□□□ 0.34
SMN2-215ENST00000628696 PACSIN3Q9UKS6 424 aa17.2■□□□□ 0.34
SMN2-215ENST00000628696 WIF1Q9Y5W5 379 aa17.2■□□□□ 0.34
SMN2-215ENST00000628696 SMNDC1O75940 238 aaKnown RBP eCLIP17.19■□□□□ 0.34
SMN2-215ENST00000628696 TGM6O95932 706 aa17.19■□□□□ 0.34
SMN2-215ENST00000628696 RPS17P08708 135 aaKnown RBP17.19■□□□□ 0.34
SMN2-215ENST00000628696 CHMP24386 653 aa17.19■□□□□ 0.34
SMN2-215ENST00000628696 IL12BP29460 328 aa17.19■□□□□ 0.34
SMN2-215ENST00000628696 KRT20P35900 424 aa17.19■□□□□ 0.34
SMN2-215ENST00000628696 CLDN18P56856 261 aa17.19■□□□□ 0.34
SMN2-215ENST00000628696 EEF1A1P68104 462 aaKnown RBP17.19■□□□□ 0.34
SMN2-215ENST00000628696 TSNAXIP1Q2TAA8 658 aa17.19■□□□□ 0.34
SMN2-215ENST00000628696 EEF1A1P5Q5VTE0 462 aa17.19■□□□□ 0.34
SMN2-215ENST00000628696 SHEQ5VZ18 495 aa17.19■□□□□ 0.34
SMN2-215ENST00000628696 CHMP1BQ7LBR1 199 aa17.19■□□□□ 0.34
SMN2-215ENST00000628696 KRTAP1-3Q8IUG1 177 aa17.19■□□□□ 0.34
SMN2-215ENST00000628696 ZNF483Q8TF39 744 aaPredicted RBP17.19■□□□□ 0.34
SMN2-215ENST00000628696 DTNBP1Q96EV8 351 aa17.19■□□□□ 0.34
SMN2-215ENST00000628696 LRRC1Q9BTT6 524 aa17.19■□□□□ 0.34
SMN2-215ENST00000628696 ZDHHC18Q9NUE0 388 aa17.19■□□□□ 0.34
SMN2-215ENST00000628696 C6orf203Q9P0P8 240 aaPredicted RBP17.19■□□□□ 0.34
SMN2-215ENST00000628696 A0A1W2PNV4 684 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 ARHGEF9O43307 516 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 ABCB7O75027 752 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 BCAS2O75934 225 aaPredicted RBP17.18■□□□□ 0.34
SMN2-215ENST00000628696 OR4F21O95013 312 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 ZNF708P17019 499 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 DPP4P27487 766 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 MAGEA12P43365 314 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 CORO7P57737 925 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 TRA2BP62995 288 aaKnown RBP17.18■□□□□ 0.34
SMN2-215ENST00000628696 FAM27E3Q08E93 113 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 EFR3AQ14156 821 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 ZNF628Q5EBL2 1059 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 TEX35Q5T0J7 233 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 LARP4Q71RC2 724 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMN2-215ENST00000628696 TAOK1Q7L7X3 1001 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 P3H2Q8IVL5 708 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 CNEP1R1Q8N9A8 125 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 OR4K17Q8NGC6 315 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 OR9A2Q8NGT5 310 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 EXOSC8Q96B26 276 aaKnown RBP17.18■□□□□ 0.34
SMN2-215ENST00000628696 SLC35A4Q96G79 324 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 FAM111AQ96PZ2 611 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 MRPL57Q9BQC6 102 aaKnown RBP17.18■□□□□ 0.34
SMN2-215ENST00000628696 VPS29Q9UBQ0 182 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 DLGAP4Q9Y2H0 992 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 TESMINQ9Y4I5 508 aa17.18■□□□□ 0.34
SMN2-215ENST00000628696 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 MSTNO14793 375 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 ZIC3O60481 467 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 TSPAN2O60636 221 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 TNFSF13O75888 250 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 CT45A8P0DMV1 189 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 CT45A9P0DMV2 189 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 COL6A2P12110 1019 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 GRK2P25098 689 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 ERCC6LQ2NKX8 1250 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 CT45A2Q5DJT8 189 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 TCHHL1Q5QJ38 904 aaPredicted RBP17.17■□□□□ 0.34
SMN2-215ENST00000628696 C8orf74Q6P047 294 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 SYT10Q6XYQ8 523 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 CXorf67Q86X51 503 aaPredicted RBP17.17■□□□□ 0.34
SMN2-215ENST00000628696 UBQLNLQ8IYU4 475 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 CDYL2Q8N8U2 506 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 ZNF675Q8TD23 568 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 ANP32BQ92688 251 aaKnown RBP17.17■□□□□ 0.34
SMN2-215ENST00000628696 EFHD2Q96C19 240 aaPredicted RBP17.17■□□□□ 0.34
SMN2-215ENST00000628696 WFIKKN1Q96NZ8 548 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 BTBD9Q96Q07 612 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 MRPL46Q9H2W6 279 aaKnown RBP17.17■□□□□ 0.34
SMN2-215ENST00000628696 PCNX3Q9H6A9 2034 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 KLHL28Q9NXS3 571 aa17.17■□□□□ 0.34
SMN2-215ENST00000628696 A8MT66 165 aa17.16■□□□□ 0.34
SMN2-215ENST00000628696 POC1B-GALNT4F8VUJ3 575 aa17.16■□□□□ 0.34
SMN2-215ENST00000628696 MANBAO00462 879 aa17.16■□□□□ 0.34
SMN2-215ENST00000628696 SMPD2O60906 423 aa17.16■□□□□ 0.34
SMN2-215ENST00000628696 IL3P08700 152 aa17.16■□□□□ 0.34
SMN2-215ENST00000628696 SERPINB9P50453 376 aa17.16■□□□□ 0.34
SMN2-215ENST00000628696 VWA1Q6PCB0 445 aa17.16■□□□□ 0.34
SMN2-215ENST00000628696 NPSR1Q6W5P4 371 aa17.16■□□□□ 0.34
SMN2-215ENST00000628696 SLC44A2Q8IWA5 706 aaPredicted RBP17.16■□□□□ 0.34
SMN2-215ENST00000628696 ZNF592Q92610 1267 aa17.16■□□□□ 0.34
SMN2-215ENST00000628696 PAFAH2Q99487 392 aa17.16■□□□□ 0.34
SMN2-215ENST00000628696 FOLH1BQ9HBA9 442 aa17.16■□□□□ 0.34
SMN2-215ENST00000628696 GIMAP4Q9NUV9 329 aa17.16■□□□□ 0.34
SMN2-215ENST00000628696 TRPS1Q9UHF7 1281 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms